YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310166, CHO...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.67
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTLAKVLL LVGSLLILCR TSHAFIVSVD AHNEECFFEN VEGGTKFGVT FEVIDGGFLD  60
   61 VDIKISGPDN HVMHESEKES SGKYTFVAPA KGTYTVCFNN ERSSMTPKLV MFSIDVGDAP 120
  121 QRAPGAPGEE EVGHTKLEDM IRELSGTLTS VKHEQEYMHV RDKIHRSVNE NTNSRVVLWS 180
  181 TFEALVLVLM TVGQVYYLKR FFEVKRVV

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	175	0.99
Transmembrane Helix	176	198	0.62
Cytoplasmic	199	208	0.66