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Protein Overview: Scgdelta-PA, FBp...

General Information:
Name(s) found: FBpp0311618 [FlyBase]
Scgdelta-PD / FBpp0291385 [FlyBase]
Scgdelta-PC / FBpp0291384 [FlyBase]
Scgdelta-PA / FBpp0070267 [FlyBase]
Description(s) found:
Found 42 descriptions.
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  • type=protein; loc=X:complement(1640424..1640612,1640720..1640843,1642065..1642326,1643730..1643850,1643928..1644446); ID=FBpp0311618; name=Scgdelta-PE; parent=FBgn0025391,FBtr0345509; dbxref=FlyBase:FBpp0311618,FlyBase_Annotation_IDs:CG14808-PE; MD5=051c30d75f8c1ae6ca7c4207c8057291; length=404; release=r5.56; species=Dmel; [FlyBase]
  • The gene Sarcoglycan Ã?&#142;Ã?´ is referred to in FlyBase by the symbol Dmel\ScgÃ?&#142;Ã?´ (CG14808, FBgn0025391). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1639909..1648096. It has the cytological map location 2B8. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of muscle. There is experimental evidence that it is involved in the biological process</span>: heart contraction; sarcomere organization; mesoderm development. 8 alleles are reported. The phenotypes of these alleles are annotated with: dorsal medial muscle; adult heart; sarcomere; M band. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • The gene Sarcoglycan Ã?&#142;Ã?´ is referred to in FlyBase by the symbol Dmel\ScgÃ?&#142;Ã?´ (CG14808, FBgn0025391). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1639909..1648096. It has the cytological map location 2B8. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of muscle. There is experimental evidence that it is involved in the biological process</span>: heart contraction; sarcomere organization; mesoderm development. 8 alleles are reported. The phenotypes of these alleles are annotated with: dorsal medial muscle; adult heart; sarcomere; M band. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • The gene Sarcoglycan Ã?&#142;Ã?´ is referred to in FlyBase by the symbol Dmel\ScgÃ?&#142;Ã?´ (CG14808, FBgn0025391). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1639909..1648096. It has the cytological map location 2B8. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of muscle. There is experimental evidence that it is involved in the biological process</span>: heart contraction; sarcomere organization; mesoderm development. 8 alleles are reported. The phenotypes of these alleles are annotated with: dorsal medial muscle; adult heart; sarcomere; M band. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    costamere [IDA]
    sarcoglycan complex [ISS][NAS]
    Biological Process: heart contraction [IMP]
    mesoderm development [IEP]
    sarcomere organization [IMP]
    cytoskeletal anchoring at plasma membrane [ISS]
    Molecular Function: structural constituent of muscle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAAGSSEIT DFGPHSRQLT AGNTPKRPNK ASSHRPGSGS GPGPMTTGGT SSASGNGNSG  60
   61 GALNAIPTTK VGSGGGGGGA MSATTVTATT GKATVSHGHS HGHALGRSET RSGRSAAAGR 120
  121 SNVDGFVGGI ETYLGLIGWR KKCLYTLLLL LMLLIITNLV LTLWILKVME FSTEGMGQLK 180
  181 IVPGGIQLSG QAIIMDMLRA STIRSRHGQP ISIESSRNFS INTRDPNGMI ENHLFLGHDK 240
  241 FECLSAGFRI NDTNGRSLFS VNRDEVTIGA HALRIDGEGG AVFRESVQTP HVRAEPGREL 300
  301 RLESPTRQLE MTAAKDINLQ SRAGGIEVVA LEDVKFRALD GSLRLESSKI LMPNLRTAQP 360
  361 PILGTAQSRD HMHRVFQLCA CSNGKLFLAA PHSICAGDDS TVCR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] deduced N/A No confident structure predictions are available.
    2 View Details [107..238] MSA 4.037968 View MSA. No confident structure predictions are available.
    3 View Details [239..404] MSA 2.034971 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle