YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cin-PA

General Information:
Name(s) found: cin-PA / FBpp0070064 [FlyBase]
Description(s) found:
Found 36 descriptions.
SHOW ALL
  • The gene cinnamon is referred to in FlyBase by the symbol Dmel\cin (CG2945, FBgn0000316). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:148943..152503. It has the cytological map location 1A1. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: Mo-molybdopterin cofactor biosynthetic process. 39 alleles are reported. The phenotypes of these alleles are annotated with: egg; pigment cell. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 601 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development via the syncytial blastoderm [TAS]
    Mo-molybdopterin cofactor biosynthetic process [ISS][NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESITFGVLT ISDTCWQEPE KDTSGPILRQ LIGETFANTQ VIGNIVPDEK DIIQQELRKW  60
   61 IDREELRVIL TTGGTGFAPR DVTPEATRQL LEKECPQLSM YITLESIKQT QYAALSRGLC 120
  121 GIAGNTLILN LPGSEKAVKE CFQTISALLP HAVHLIGDDV SLVRKTHAEV QGSAQKSHIC 180
  181 PHKTGTGTDS DRNSPYPMLP VQEVLSIIFN TVQKTANLNK ILLEMNAPVN IPPFRASIKD 240
  241 GYAMKSTGFS GTKRVLGCIA AGDSPNSLPL AEDECYKINT GAPLPLEADC VVQVEDTKLL 300
  301 QLDKNGQESL VDILVEPQAG LDVRPVGYDL STNDRIFPAL DPSPVVVKSL LASVGNRLIL 360
  361 SKPKVAIVST GSELCSPRNQ LTPGKIFDSN TTMLTELLVY FGFNCMHTCV LSDSFQRTKE 420
  421 SLLELFEVVD FVICSGGVSM GDKDFVKSVL EDLQFRIHCG RVNIKPGKPM TFASRKDKYF 480
  481 FGLPGNPVSA FVTFHLFALP AIRFAAGWDR CKCSLSVLNV KLLNDFSLDS RPEFVRASVI 540
  541 SKSGELYASV NGNQISSRLQ SIVGADVLIN LPARTSDRPL AKAGEIFPAS VLRFDFISKY 600
  601 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] PSI-BLAST 37.39794 Gephyrin N-terminal domain
    2 View Details [177..601] PSI-BLAST 100.0 Structural basis of dynamic glycine receptor clustering

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.9303555688427 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.53018333943857 bayes_pls_golite062009
  • binding
    		•  0.101786434317917 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle