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Protein Overview: CG1909-PB, CG1909-PA

General Information:
Name(s) found: CG1909-PB / FBpp0088149 [FlyBase]
CG1909-PA / FBpp0088148 [FlyBase]
Description(s) found:
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  • gi|24638654|ref|NP_726586.1| CG1909, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22759357|gb|AAF59332.2| CG1909, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22759356|gb|AAF59333.2| CG1909, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21356809|ref|NP_651928.1| CG1909, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|15291463|gb|AAK93000.1| GH22690p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1909 (CG1909, FBgn0039911). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 4:603737..609976. It has the cytological map location 102C6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: acetylcholine receptor binding; zinc ion binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: synaptic transmission. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG1909-PA translation from_gene[CG1909 CG1909 FBgn0039911] seq_release:3 mol_weight=67098 cds_boundaries:(4:603,565..608,686[+]) aa_length:606 transcript_info:[CG1909-RA seq_release:3] gene_info:[gene symbol:CG1909 FBgn0039911 gene_boundaries:(4:602,8 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG1909-PB translation from_gene[CG1909 CG1909 FBgn0039911] seq_release:3 mol_weight=67098 cds_boundaries:(4:603,565..608,686[+]) aa_length:606 transcript_info:[CG1909-RB seq_release:3] gene_info:[gene symbol:CG1909 FBgn0039911 gene_boundaries:(4:602,8 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V4E2) CG1909 protein (GH22690p) [DrosMelano7227.FASTAC.txt]
  • CG1909-PB, isoform B [Drosophila melanogaster]gi|22759356|gb|AAF59333.2| CG1909-PA, isoform A [Drosophila melanogaster]gi|15291463|gb|AAK93000.1| GH22690p [Drosophila melanogaster]gi|24638654|ref|NP_726586.1| CG1909-PB [Drosophila melanogaster]gi|2135 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB [fly-100309-contam.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB [fly-100309-contam.fasta]
  • CG1909-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG1909-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH22690p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1909, isoform A OS=Drosophila melanogaster GN=CG1909 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333,FlyMine:FBpp0088148,modMine:FBpp0088148; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=4:join(604452..604489,604562..604644,605388..605557,605616..605800,605924..606398,606466..606564,607528..607719,608469..608668,609198..609576); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG1909, isoform A OS=Drosophila melanogaster GN=CG1909 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333,FlyMine:FBpp0088148,modMine:FBpp0088148; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333,FlyMine:FBpp0088148,modMine:FBpp0088148; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0088148 type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333,FlyMine:FBpp0088148,modMine:FBpp0088148; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0088149 type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088148; name=CG1909-PA; parent=FBgn0039911,FBtr0089079; dbxref=FlyBase:FBpp0088148,GB_protein:AAF59333.2,FlyBase_Annotation_IDs:CG1909-PA,REFSEQ:NP_651928,GB_protein:AAF59333,UniProt/TrEMBL:Q7K4Y8,FlyMine:FBpp0088148,modMine:FBpp0088148; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=4:join(583826..583863,583936..584018,584762..584931,584990..585174,585298..585772,585840..585938,586902..587093,587843..588042,588572..588950); ID=FBpp0088149; name=CG1909-PB; parent=FBgn0039911,FBtr0089080; dbxref=FlyBase:FBpp0088149,GB_protein:AAF59332.2,FlyBase_Annotation_IDs:CG1909-PB,REFSEQ:NP_726586,GB_protein:AAF59332,UniProt/TrEMBL:Q7K4Y8; MD5=3f80b13aedb7062366ede3bcf2bda33e; length=606; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEA]
    postsynaptic membrane [IEA]
    cell junction [IEA]
    plasma membrane [UNKNOWN]
    Biological Process: synaptic transmission [IEA]
    Molecular Function: zinc ion binding [IEA]
    acetylcholine receptor binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWESINSKD LLSIPPSQNL SATRLLTSPD GSRYLLENSS DLCHLDESFS RLAGYGSSPD  60
   61 VGSRSVWASQ ALLRSGSVIS CFLSCQQSLR QYIAKRKIER GRRLYEQNNQ TEAVRTWRSA 120
  121 LKGTCQREDC FQLLGYLYQA HMDWGKFREA IEFSHQQLGI SEELDSPNMR AETYLNLSRA 180
  181 HASLGGLERS LSYARHSLYN ECGTKCRSGL VHLTVARVYL EMGGFSRALE GLQGAYKIAT 240
  241 AIGDPSLELQ VYVALSELFG RLQDNDKSAT YASKAYDLSR SLQLGDLNSC HHRAALLRMA 300
  301 VSLRKQGELG DAQDYCKEAT KLSLISGDQA TYTRSIRVMG DIYRNKMDMD RAFRQYEQAM 360
  361 GTSASLGDRM AQMEAMDGAA RCLETLRLQN KICNCRPLEF NTRLLEVASS IGAKFLVRKI 420
  421 RCRLALIYRA LGDEDQYNTH FRLANQTDAA LGLNCGACGE LLGLRPENLE ALPCAHILHA 480
  481 RCAYEILRRR EKNAPRSCPA CNKLISSRTH FCGSVPVESE STDRCVTAAS TFNTNSLSVD 540
  541 GLLGINSDIL LPSAAFCYVK NPALDTENSA LLSPKVIYHS NLSLASLSMR ASSLTIDSGQ 600
  601 NVTSSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..606] PSI-BLAST 25.0 No description for 2gw1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle