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View Structure Prediction Details

Protein: CG1909-PB, CG1909-PA
Organism: Drosophila melanogaster
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1909-PB, CG1909-PA.

Description E-value Query
Range
Subject
Range
gi|113476999, gi... - gi|113476999|ref|YP_723060.1| peptidase-like [Trichodesmium erythraeum IMS101], gi|110168047|gb|ABG5...
304.0 [0..3] [605..174]

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Predicted Domain #1
Region A:
Residues: [1-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWESINSKD LLSIPPSQNL SATRLLTSPD GSRYLLENSS DLCHLDESFS RLAGYGSSPD  60
   61 VGSRSVWASQ ALLRSGSVIS CFLSCQQSLR QYIAKRKIER GRRLYEQNNQ TEAVRTWRSA 120
  121 LKGTCQREDC FQLLGYLYQA HMDWGKFREA IEFSHQQLGI SEELDSPNMR AETYLNLSRA 180
  181 HASLGGLERS LSYARHSLYN ECGTKCRSGL VHLTVARVYL EMGGFSRALE GLQGAYKIAT 240
  241 AIGDPSLELQ VYVALSELFG RLQDNDKSAT YASKAYDLSR SLQLGDLNSC HHRAALLRMA 300
  301 VSLRKQGELG DAQDYCKEAT KLSLISGDQA TYTRSIRVMG DIYRNKMDMD RAFRQYEQAM 360
  361 GTSASLGDRM AQMEAMDGAA RCLETLRLQN KICNCRPLEF NTRLLEVASS IGAKFLVRKI 420
  421 RCRLALIYRA LGDEDQYNTH FRLANQTDAA LGLNCGACGE LLGLRPENLE ALPCAHILHA 480
  481 RCAYEILRRR EKNAPRSCPA CNKLISSRTH FCGSVPVESE STDRCVTAAS TFNTNSLSVD 540
  541 GLLGINSDIL LPSAAFCYVK NPALDTENSA LLSPKVIYHS NLSLASLSMR ASSLTIDSGQ 600
  601 NVTSSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle