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Protein Overview: FBpp0300615, RpS...

General Information:
Name(s) found: FBpp0300615 [FlyBase]
RpS3A-PA / FBpp0088242 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=4:complement(86899..87364,87466..87806); ID=FBpp0300615; name=RpS3A-PF; parent=FBgn0017545,FBtr0308296; dbxref=FlyBase:FBpp0300615,FlyBase_Annotation_IDs:CG2168-PF,REFSEQ:NP_001245404,GB_protein:AFH06764; MD5=01e3a94c58ad043665c9117cee125392; length=268; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein S3A is referred to in FlyBase by the symbol Dmel\RpS3A (CG2168, FBgn0017545). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 4:86745..87863. It has the cytological map location 101F1. There is experimental evidence that it has the molecular function</span>: SUMO binding. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 6 alleles are reported. The phenotypes of these alleles are annotated with: adult; macrochaeta. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    cytosolic ribosome [NAS]
    cytosolic small ribosomal subunit [ISS][NAS]
    Biological Process: mitotic spindle elongation [IMP]
    oogenesis [NAS]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: SUMO binding [IPI]
    structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGKNKGLS KGGKKGGKKK VVDPFSRKDW YDVKAPNMFQ TRQIGKTLVN RTQGQRIASD  60
   61 YLKGRVFEVS LADLQKDIDP ERSFRKFRLI AEDVQDRNVL CNFHGMDLTT DKYRSMVKKW 120
  121 QTLIEAIVEA KTVDGYLLRV FCIGFTAKDQ QSQRKTCYAQ QSQVRKIRAR MTDIITNEVS 180
  181 GADLKQLVNK LALDSIAKDI EKSCQRIYPL HDVYIRKVKV LKKPRFDVSK LLELHGDGGG 240
  241 KSVEAVVSSE GAVIDRPEGY EPPVQEAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] MSA 5.069944 View MSA. No confident structure predictions are available.
    2 View Details [206..268] MSA 7.051991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle