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Protein Overview: Rpt6R-PA

General Information:
Name(s) found: Rpt6R-PA / FBpp0085042 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\Rpt6R (CG2241, FBgn0039788). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:26407920..26409419. It has the cytological map location 99F9-99F10. Based on sequence similarity, it is predicted to have molecular function</span>: ATPase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proteolysis. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle, base subcomplex [ISS]
    cytoplasm [IEA]
    Biological Process: proteolysis [ISS]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDVGIPEG SEGFHSYYTQ KISELQFTVN ERQKNLLRLQ AQRNELNLKV RLLREELQLL  60
   61 QEQGSYIAEV VKPMDKNKVL VKVHPEGKYV VDVDKTINIK DVTPSSRVAL RNESYTLHKI 120
  121 LPNKVDPLVS LMLVEKVPDS TYEMVGGLDK QIQEIKEVIE LPVKHPELFD ALGITQPKGV 180
  181 LLYGPPGTGK TLLARAVAHH TECTFIRVSG SELVQKFIGE GSRMVRELFV MAREHAPSII 240
  241 FMDEIDSIGS ARLETGTGDS EVQRTMLELL NQLDGFEATK NIKVIMATNR IDVLDQALLR 300
  301 PGRIDRKIEF PPPNEEARLD ILKIHSRKMN LTRGINLRKI AEEMPGASGA EVKGVCTEAG 360
  361 MYALRERRVH VTQEDFEMAV SKVMMKDSEK NMSIRKFWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..399] PSI-BLAST 83.69897 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle