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Protein Overview: Ef1gamma-PA, Ef1...

General Information:
Name(s) found: FBpp0308925 [FlyBase]
Ef1gamma-PC / FBpp0291632 [FlyBase]
Ef1gamma-PA / FBpp0084762 [FlyBase]
Ef1gamma-PB / FBpp0084761 [FlyBase]
Description(s) found:
Found 40 descriptions.
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  • type=protein; loc=3R:join(25046019..25046030,25046152..25046301,25046365..25047498); ID=FBpp0308925; name=Ef1gamma-PD; parent=FBgn0029176,FBtr0339893; dbxref=FlyBase:FBpp0308925,FlyBase_Annotation_IDs:CG11901-PD; MD5=7a3335c94c68f5c5ed188081c655b1c3; length=431; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ef1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\Ef1Ã?&#142;Ã?³ (CG11901, FBgn0029176). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25045888..25047831. It has the cytological map location 99A1. Based on sequence similarity, it is predicted to have molecular function</span>: translation elongation factor activity. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 9 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Ef1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\Ef1Ã?&#142;Ã?³ (CG11901, FBgn0029176). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25045888..25047831. It has the cytological map location 99A1. Based on sequence similarity, it is predicted to have molecular function</span>: translation elongation factor activity. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 9 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Ef1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\Ef1Ã?&#142;Ã?³ (CG11901, FBgn0029176). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25045888..25047831. It has the cytological map location 99A1. Based on sequence similarity, it is predicted to have molecular function</span>: translation elongation factor activity. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 9 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    nucleus [IDA]
    cytoplasm [IDA]
    cytosol [NAS]
    eukaryotic translation elongation factor 1 complex [ISS][NAS]
    Biological Process: autophagic cell death [IEP]
    salivary gland cell autophagic cell death [IEP]
    translational elongation [ISS]
    Molecular Function: translation elongation factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKGTLYTYP ENFRAYKALI AAQYSGAQVK VADNFKFGET NKSAEFLKKF PGGKVPAFET  60
   61 AEGQYLSESN AIAYLLANEQ LRGGKCPFVQ AQVQQWISFA DNEIVPASCA WVFPLLGILP 120
  121 QQKNSTAKQE AEAVLQQLNQ KLQDATFLAG ERITLADIVV FSSLLHLYEY VLEPSVRSAF 180
  181 GNVNRWFVTI LNQKQVQAVV KDYKLCEKAL VFDPKKYAEF QAKTGAAKPQ QQAQQQKQEK 240
  241 KPKEKKEAPK KAAEPAEELD AADEALAAEP KSKDPFDALP KGTFNFDDFK RVYSNEDEAK 300
  301 SIPYFFDKFD AENYSIWFGE YKYNEELSKV FMSCNLITGM FQRLDKMRKA AFASVCLFGE 360
  361 DGNSTISGIW VWRGQDLAFT LSPDWQIDYE VYDWKKLDAK SEETKKLVTQ YFSWSGTDKD 420
  421 GRKFNQGKIF K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 30.0 Class theta GST
    2 View Details [259..431] PSI-BLAST 73.0 Elongation factor 1-gamma C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle