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Protein Overview: side-PA

General Information:
Name(s) found: side-PA / FBpp0084538 [FlyBase]
Description(s) found:
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  • gi|24650621|ref|NP_524530.2| sidestep, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|23172431|gb|AAF56708.2| sidestep, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene sidestep is referred to in FlyBase by the symbol Dmel\side (CG31062, FBgn0016061). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23202304..23244247. It has the cytological map location 97F6-97F10. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: motor axon guidance. 15 alleles are reported. The phenotypes of these alleles are annotated with 15 unique terms, many of which group under: organ system; embryonic neuron; abdominal longitudinal muscle; multi-cell-component structure; abdominal oblique muscle; embryonic nervous system; peripheral nervous system; ventral longitudinal muscle; embryonic/larval hypodermal muscle; nervous system; acute muscle. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG31062-PA translation from_gene[CG31062 side FBgn0016061] seq_release:3 mol_weight=101660 cds_boundaries:(3R:23,191,672..23,233,612[-]) aa_length:939 transcript_info:[CG31062-RA seq_release:3] gene_info:[gene symbol:side synonyms:[CG13974 CG13979 CG1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VB35) CG31062-PA [DrosMelano7227.FASTAC.txt]
  • CG31062-PA [Drosophila melanogaster]gi|24650621|ref|NP_524530.2| CG31062-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(23202304..23202368,23208030..23208277,23209924..23210191,23212782..23212956,23214177..23214403,23215338..23215488,23216612..23216760,23218429..23218567,23220731..23220867,23222166..23222301,23223511..23223680,23223896..2322 [fly-100309-contam.fasta]
  • CG31062-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • sidestep CG31062-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(23202304..23202368,23208030..23208277,23209924..23210191,23212782..23212956,23214177..23214403,23215338..23215488,23216612..23216760,23218429..23218567,23220731..23220867,23222166..23222301,23223511..23223680,23223896..23224108,23224611..23224721,23224794..23225008,23226018..23226150,23243965..23244247); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(23202304..23202368,23208030..23208277,23209924..23210191,23212782..23212956,23214177..23214403,23215338..23215488,23216612..23216760,23218429..23218567,23220731..23220867,23222166..23222301,23223511..23223680,23223896..23224108,23224611..23224721,23224794..23225008,23226018..23226150,23243965..23244247); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Sidestep, isoform A OS=Drosophila melanogaster GN=side PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(23202304..23202368,23208030..23208277,23209924..23210191,23212782..23212956,23214177..23214403,23215338..23215488,23216612..23216760,23218429..23218567,23220731..23220867,23222166..23222301,23223511..23223680,23223896..23224108,23224611..23224721,23224794..23225008,23226018..23226150,23243965..23244247); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708,FlyMine:FBpp0084538,modMine:FBpp0084538; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Sidestep, isoform A OS=Drosophila melanogaster GN=side PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(27418243..27418525,27400296..27400428,27399072..27399286,27398889..27398999,27398174..27398386,27397789..27397958,27396444..27396579,27395009..27395145,27392707..27392845,27390890..27391038,27389616..27389766,27388455..27388681,27387060..27387234,27384202..27384469,27382308..27382555,27376582..27376646)); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708,FlyMine:FBpp0084538,modMine:FBpp0084538; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(27418243..27418525,27400296..27400428,27399072..27399286,27398889..27398999,27398174..27398386,27397789..27397958,27396444..27396579,27395009..27395145,27392707..27392845,27390890..27391038,27389616..27389766,27388455..27388681,27387060..27387234,27384202..27384469,27382308..27382555,27376582..27376646)); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708,FlyMine:FBpp0084538,modMine:FBpp0084538; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4K7N1, Sidestep, isoform A OS=Drosophila melanogaster GN=side PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0084538 type=protein; loc=3R:complement(join(27418243..27418525,27400296..27400428,27399072..27399286,27398889..27398999,27398174..27398386,27397789..27397958,27396444..27396579,27395009..27395145,27392707..27392845,27390890..27391038,27389616..27389766,27388455..27388681,27387060..27387234,27384202..27384469,27382308..27382555,27376582..27376646)); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708,FlyMine:FBpp0084538,modMine:FBpp0084538; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(27418243..27418525,27400296..27400428,27399072..27399286,27398889..27398999,27398174..27398386,27397789..27397958,27396444..27396579,27395009..27395145,27392707..27392845,27390890..27391038,27389616..27389766,27388455..27388681,27387060..27387234,27384202..27384469,27382308..27382555,27376582..27376646)); ID=FBpp0084538; name=side-PA; parent=FBgn0016061,FBtr0085168; dbxref=FlyBase:FBpp0084538,FlyBase_Annotation_IDs:CG31062-PA,GB_protein:AAF56708.2,REFSEQ:NP_524530,GB_protein:AAF56708,UniProt/TrEMBL:Q9VB35,FlyMine:FBpp0084538,modMine:FBpp0084538; MD5=e471670e87447ed5e0d023d2ae39db88; length=939; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 939 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: motor axon guidance [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLLPTSGM PTNTLETETP AMQTTYWPRQ TGNSKSKSNT NCKCNINTHR KSRTRCPDNG  60
   61 KTIWAVGFTL VLLTCLQQLK SVSADEESQD FQKNIPARLV WAALGKTVEL PCDLTPPTSQ 120
  121 DSVKLLLWFK DTTGIPLYSL DSRGGNVKLA PHAAIASDLG QRLFFSIGDN PKDSRLQIND 180
  181 VKPEDGGVYR CRVDFFNSPT RNFRHNLTLV VPPEEPRIFD AQGKEISQMA GPFREGYELF 240
  241 LCCQVRGGRP PPKVTWWRDD TELIGTSHTS VEEGATVMVN QLLIGTTTRD FYGIRIECRA 300
  301 QGTRLVDPVR KDVTVQVYLK PVRVKIATPN ELLTAGQPMP IRCESWGSYP AAKITWLLDG 360
  361 EPIRNAEVTV HSDKEDGNIT TSILTLKVTS ENDNAELTCR ATNPWFSGGA IEDKRIIRVA 420
  421 YPPTVSVHLA NEDPSRLVTR AEGQNVTFKC RADARPPVTS YSWFKNGMRM SGESTEIMHL 480
  481 TQLERESAGA YACGATNTEG ETRSSSLTLK VQFSPRCKSG TEQTSIGAVS LHSILVKCEV 540
  541 DADPPDSVRF SWTYNNTRNV SPVLNSRIQS NGLASTVTYL PQTDSELITL ACWASNAVGR 600
  601 QTTPCLVHIL PANTPEAPKA CELRNDTVLE VVCVAGSDGG LSQYFMLEVV GGDPLYSGDP 660
  661 GGSAGQGRGQ FSEAIGLGDN EISTLNDQAT SAPIFRMQEN SPQFRLNNLE PGREYQFLVY 720
  721 AVNAKGRSEP PVVIENVRVA AQLGPYDESI LSEDPTPAET THHGGGGVGG SGSSSGLGTG 780
  781 ASTGSGPEKQ STLLILAAVV VIGAVVVTSI IVAGIVVVCR HRPRPPEPQE VRKSMRPARN 840
  841 DVPSMYIEED ELNELEEGGG RAADIRARVA PPNSHLCGGG GMPMPGGVGS SGGAIVGVAG 900
  901 PHHYISESFI QYAQPSLNDP DLILPRGELE FTTLDPTLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..615] PSI-BLAST 46.221849 Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
    2 View Details [616..939] PSI-BLAST 16.0 No description for 2v5yA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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