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Protein Overview: CG6142-PA

General Information:
Name(s) found: CG6142-PA / FBpp0084360 [FlyBase]
Description(s) found:
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  • gi|7301449|gb|AAF56574.1| CG6142 [Drosophila melanogaster] [NCBI NR]
  • gi|24650267|ref|NP_651466.1| CG6142 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6142 (CG6142, FBgn0039415). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21960717..21962680. It has the cytological map location 97A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: oxidoreductase activity, acting on CH-OH group of donors; FAD binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: alcohol metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6142-PA translation from_gene[CG6142 CG6142 FBgn0039415] seq_release:3 mol_weight=69185 cds_boundaries:(3R:21,950,082..21,952,042[+]) aa_length:616 transcript_info:[CG6142-RA seq_release:3] gene_info:[gene symbol:CG6142 FBgn0039415 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBG8) CG6142 protein [DrosMelano7227.FASTAC.txt]
  • (AE003755) CG6142 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6142-PA [Drosophila melanogaster]gi|24650267|ref|NP_651466.1| CG6142-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(21960717..21961911,21961971..21962257,21962312..21962680); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_prot [fly-100309-contam.fasta]
  • CG6142-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(21960717..21961911,21961971..21962257,21962312..21962680); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(21960717..21961911,21961971..21962257,21962312..21962680); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6142 OS=Drosophila melanogaster GN=CG6142 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(21960717..21961911,21961971..21962257,21962312..21962680); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574,FlyMine:FBpp0084360,modMine:FBpp0084360; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(26134995..26136189,26136249..26136535,26136590..26136958); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574,FlyMine:FBpp0084360,modMine:FBpp0084360; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(26134995..26136189,26136249..26136535,26136590..26136958); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574,FlyMine:FBpp0084360,modMine:FBpp0084360; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG6142 OS=Drosophila melanogaster GN=CG6142 PE=3 SV=1 [DROME.fasta.20160308]
  • FBpp0084360 type=protein; loc=3R:join(26134995..26136189,26136249..26136535,26136590..26136958); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574,FlyMine:FBpp0084360,modMine:FBpp0084360; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(26134995..26136189,26136249..26136535,26136590..26136958); ID=FBpp0084360; name=CG6142-PA; parent=FBgn0039415,FBtr0084987; dbxref=FlyBase:FBpp0084360,FlyBase_Annotation_IDs:CG6142-PA,GB_protein:AAF56574.1,REFSEQ:NP_651466,GB_protein:AAF56574,UniProt/TrEMBL:Q9VBG8,FlyMine:FBpp0084360,modMine:FBpp0084360; MD5=1bc584bc9f791ea60d32bd2617d1097e; length=616; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: alcohol metabolic process [IEA]
    Molecular Function: oxidoreductase activity, acting on CH-OH group of donors [IEA]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFCGVLIIC LWYIQVTWSQ LLVDLARDFE TSFLNNRIPD TTRFLPEYDF IIVGAGSAGC  60
   61 VMANRLSEIS SASVLLLEAG DQETFISDVP LTAALTQMTR YNWGYKAEPT EHACQGLKGG 120
  121 VCNWPKGRGV GGTSLINFML YTRGHRRDYD EWAAANNSGW SYDELLPYFR KSERIGIPEL 180
  181 YKSPYHGRNG QLDVQYTDYR SQLLKAFLKS GREMGYEITD PNGEHLMGFA RSQATIRNGR 240
  241 RCSTSKAFIQ PVVNRKNLHI SMKSWVTRLI IDPITKTATG VEFVKQRQRY VVRARKEVIL 300
  301 SAGTIASPQL LMLSGIGPAE HLREHNITVM QDLPVGYNLQ DHITLNGLVF VVNDSTVNDA 360
  361 RLLNPSDIFR YIFAGQGPYT IPGGAEAFAF VRTPSSKFAK DYPDMELVLG AGSLSGDRFG 420
  421 TMRNLLGITD EFYDYMFGDL QSKETFGLVP VLLRPKSRGR ISLRSRNPFH WPRMEPNFMQ 480
  481 HPDDVRAMIE GIEMILKLSR SKPMAKMGTR FHDRPFPGCE NLKFASEAYW KCCLRRYGSS 540
  541 LQHQSGTCKM GPATDNTSVV DAQLRIHGIR GLRVVDASVL PNVPAGHTNA IVIMVAEKAG 600
  601 DMIKDAWRMP ITPLSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..616] PSI-BLAST 89.0 Glucose oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • choline dehydrogenase activity
    		•  4.66965094791663 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  4.10319574017291 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.3417445147889 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.47575323060551 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  1.34149762265767 bayes_pls_golite062009
  • glucose dehydrogenase activity
    		•  1.30840878956762 bayes_pls_golite062009
  • transporter activity
    		•  1.29839290134235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07862908893913 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • monooxygenase activity
    		•  0.72374980280274 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.704326257168965 bayes_pls_golite062009
  • binding
    		•  0.694618787489897 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.556967966402473 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.442625746935807 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.31459693204333 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  0.242456601435627 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.170082356807927 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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