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Protein Overview: veli-PA

General Information:
Name(s) found: veli-PA / FBpp0084162 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene veli is referred to in FlyBase by the symbol Dmel\veli (CG7662, FBgn0039269). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20890140..20891317. It has the cytological map location 96B19. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. It is reported to be involved in the biological process</span>: establishment or maintenance of cell polarity. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 195 amino acids

    Gene Ontology:
    Cellular Component: subapical complex [IDA]
    postsynaptic membrane [IDA]
    Biological Process: establishment or maintenance of cell polarity [NAS]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNAEPLTL SRDVKRSIEL LEKLQASGDF PTTKLAALQK VLNSDFMTSV REVYEHVYET  60
   61 VDIQGSHDVR ASATAKATVA AFAASEGHAH PRVVELPKTE EGLGFNVMGG KEQNSPIYIS 120
  121 RIIPGGVADR HGGLKRGDQL LSVNGVSVEG ENHEKAVELL KQAVGSVKLV VRYTPKVLEE 180
  181 MEMRFDKQRN TRRRQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] FFAS03 4.47 Solution Structure of mLin-2/mLin-7 L27 Domain Complex
    2 View Details [79..195] PSI-BLAST 20.69897 No description for 2dkrA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • epidermal growth factor receptor binding
    		•  2.83728577240611 bayes_pls_golite062009
  • binding
    		•  1.72922707266313 bayes_pls_golite062009
  • protein binding
    		•  1.08813585723961 bayes_pls_golite062009
  • PDZ domain binding
    		•  0.950044269901752 bayes_pls_golite062009
  • receptor binding
    		•  0.684990774885903 bayes_pls_golite062009
  • protein domain specific binding
    		•  0.450006870427269 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle