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Protein Overview: Syx18-PA

General Information:
Name(s) found: Syx18-PA / FBpp0084050 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Syntaxin 18 is referred to in FlyBase by the symbol Dmel\Syx18 (CG13626, FBgn0039212). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20449516..20451302. It has the cytological map location 96A12-96A13. Based on sequence similarity, it is predicted to have molecular function</span>: SNAP receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: vesicle-mediated transport. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDA]
    neuromuscular junction [IDA]
    plasma membrane [NAS]
    Biological Process: neuromuscular junction development [IMP]
    vesicle-mediated transport [ISS][NAS]
    neuromuscular synaptic transmission [IMP]
    neurotransmitter secretion [NAS]
    Molecular Function: SNAP receptor activity [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITQSFKAS VMTVRLQRKA ELAGKAKPAT VPTKTGPIGP KDDFAKQAKE VCNKITSLRN  60
   61 VLIENRTAYM RIGQHLKSAA HMTDAQRDLI DRESEKFVTF YTQHLAKMRS DWKSAKRKPQ 120
  121 ERQHIDAVLD LLVSYLHSVE QIYLDQKKYR VQHELETYRL LKLAADKKKI PVRPAGSNSG 180
  181 KLGRRQVSND DSEATKSSSQ ANGNHDESAD NDWNNDAWGD WDEDEEGDEV DDHDGEKGKE 240
  241 ANQANQHKPR TRKRSKANRS DLNNSSSKMA LDEELQQQQE ADDDDPLSAE DVQLFEAENV 300
  301 HIYNFLQGVS EEVEQIEKNV VDIAQLQDIF TEKVAMQQHN IDRIVSAVVG TTENVKDANE 360
  361 QIRQATQRNA GLRVWSLFFL LVMSFSLLFL DWYYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 8.522879 Heavy meromyosin subfragment
    2 View Details [313..395] PSI-BLAST 3.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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