Description(s) found:
SHOW ONLY BEST
|
gi|7301026|gb|AAF56162.1| CG10254, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|4972766|gb|AAD34778.1| unknown [Drosophila melanogaster]
[NCBI NR]
gi|24649371|ref|NP_732888.1| CG10254, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|23172076|gb|AAN13952.1| CG10254, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|21355325|ref|NP_651170.1| CG10254, isoform A [Drosophila melanogaster]
[NCBI NR]
This gene is referred to in FlyBase by the symbol Dmel\CG10254 (CG10254, FBgn0027512). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:19514727..19520705. It has the cytological map location 95A7. Based on sequence similarity, it is predicted to have molecular function</span>: ubiquitin-protein ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: post-translational protein modification; regulation of protein metabolic process. 9 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides.
[FlyBase]
>CG10254-PB translation from_gene[CG10254 BcDNA:LD22087 FBgn0027512] seq_release:3 mol_weight=156647 cds_boundaries:(3R:19,505,911..19,510,827[-]) aa_length:1398 transcript_info:[CG10254-RB seq_release:3] gene_info:[gene symbol:BcDNA:LD22087 FBgn002751
[hmr_yeast5_DM3-1_pombe.fasta]
>CG10254-PA translation from_gene[CG10254 BcDNA:LD22087 FBgn0027512] seq_release:3 mol_weight=156647 cds_boundaries:(3R:19,505,911..19,510,827[-]) aa_length:1398 transcript_info:[CG10254-RA seq_release:3] gene_info:[gene symbol:BcDNA:LD22087 FBgn002751
[hmr_yeast5_DM3-1_pombe.fasta]
(Q9XZ32) BCDNA:LD22087 protein (EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2) (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
[DrosMelano7227.FASTAC.txt]
(AE003744) BcDNA:LD22087 gene product [Drosophila melanogaster]
[yeastflysequest.fasta]
CG10254-PB, isoform B [Drosophila melanogaster]gi|7301026|gb|AAF56162.1| CG10254-PA, isoform A [Drosophila melanogaster]gi|4972766|gb|AAD34778.1| unknown [Drosophila melanogaster]gi|21355325|ref|NP_651170.1| CG10254-PA [Drosophila melanogaster]gi|2464
[nrdb_11152004_Chlamydomonas]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083867; name=CG10254-PB; parent=FBgn002751
[fly-100309-contam.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083868; name=CG10254-PA; parent=FBgn002751
[fly-100309-contam.fasta]
CG10254-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG10254-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
unknown [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
CG10254, isoform A OS=Drosophila melanogaster GN=CG10254 PE=1 SV=1
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:complement(19515251..19515459,19515514..19515732,19515798..19516767,19516831..19517734,19517793..19518534,19518611..19518869,19519057..19519261,19519321..19519583,19519745..19520170); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162,FlyMine:FBpp0083868,modMine:FBpp0083868; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
CG10254, isoform A OS=Drosophila melanogaster GN=CG10254 PE=2 SV=1
[UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162,FlyMine:FBpp0083868,modMine:FBpp0083868; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162,FlyMine:FBpp0083868,modMine:FBpp0083868; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FBpp0083867 type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0083868 type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162,FlyMine:FBpp0083868,modMine:FBpp0083868; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083867; name=CG10254-PB; parent=FBgn0027512,FBtr0084476; dbxref=FlyBase:FBpp0083867,FlyBase_Annotation_IDs:CG10254-PB,GB_protein:AAN13952.1,REFSEQ:NP_732888,GB_protein:AAN13952,UniProt/TrEMBL:Q9XZ32; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=3R:complement(join(23694023..23694448,23693599..23693861,23693335..23693539,23692889..23693147,23692071..23692812,23691109..23692012,23690076..23691045,23689792..23690010,23689529..23689737)); ID=FBpp0083868; name=CG10254-PA; parent=FBgn0027512,FBtr0084477; dbxref=FlyBase:FBpp0083868,FlyBase_Annotation_IDs:CG10254-PA,GB_protein:AAF56162.1,REFSEQ:NP_651170,GB_protein:AAF56162,UniProt/TrEMBL:Q9XZ32,FlyMine:FBpp0083868,modMine:FBpp0083868; MD5=c0973df10c31fadd72520e6b99771025; length=1398; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|