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View Structure Prediction Details

Protein: CG10254-PA, CG10...
Organism: Drosophila melanogaster
Length: 1398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10254-PA, CG10....

Description E-value Query
Range
Subject
Range
gi|125773119, gi... - gi|54637551|gb|EAL26953.1| GA10196-PA [Drosophila pseudoobscura], gi|125773119|ref|XP_001357818.1| G...
1190.0 [0..52] [1398..236]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSDVAGAAA PGGTPGQPQQ EQEQSLAEAA PRTPTLANPP PSSQELGRTP NQESRHNANS  60
   61 HSRRSGGGQV PSKAQGNTES QFFLEDGVFR IDRRGRVHFG LVTATTETYS SSEEEDVDSL 120
  121 SRGEVRVAFY 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGGKEMVMTE QSIGLADRTL MPGDVVRRRL PGENVLAGQA GYVRDVNVRA DVMVMGSRMV  60
   61 IKNVPAERLR PISEWNQYVP LCMDTWIGTI IDINECAVLK SSNGARVEIT SNDFHKFKDA 120
  121 VSECDRTVFN PNVFFPGNIV IGRMPPPDRV KNLTPEITHP LTRKGRAVYT VESVETTSIN 180
  181 VDWSCRAIGN ATGSDDTDSD PLKEPRSLIK GEELHK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [347-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKRLSLYESY ELQIHDRFYL KYSKCDLLVK YADWENEQAE KYIPIFHAQK KMQRKASKLN  60
   61 ASASTSGNAR SVPKFRRMPN KISGMRLPRP PSDQTHNACK SSKRSKEDVL TSEDEDEFEE 120
  121 FMQPLDQSMT AEKEVEVAED AL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [489-601]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSAATTAAA GVEVQAPRIT MRSAKRRQVK KKIRSVKKTI YSPFNKKETT PKDGDEIVVE  60
   61 TLVVYSSVTV VWQDGTVESG VHSTQLYPIH HLDNHEFFPG DFVTKANDIS TGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [602-862]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDYGVIQCVD HDARIAKVMW FNIYTNIDNP IPLFKGLEEL SVYDMKDHTD YQYRPGTVVI  60
   61 RVSNFTGEDV NSTAGQVIDN YPNGRVRVWW AKGHITLCYP QDLFQPFEQD EQNEQDQDVY 120
  121 GSDGSEDSWE TESENSHISS SDNDDDILTG IDRATEAMKV LEKMFRVLHP NRKAEVLYDL 180
  181 LDVYKNCRAL DRLLNTKFFD EFNFKGIVRC KPITSKVCSD SATHERATPE TPETSAAVPK 240
  241 ESSTLQAELE PVLMDPSVQS S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [863-1116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSPTKRKSST EMDEVLCKKS TDEISEEQDY QVEVVEVIED PPLVREYRCK YNEMFANARR  60
   61 SIAKAIENRT KNDSGVHSRG EITSDESNNH PDSENKLDIK HPTINVMDDL EIELVASGDA 120
  121 DVCEVFCYLI KFQMARIRKT VAVTLGKTND NPKQEKEDVS DAEEAIEAVS QEAELANDGA 180
  181 TECNTMAEDE AMEEPLNLNA LSESLPAIDQ TGPMACSSPS WSIIPDTPSV DENCFQVLPN 240
  241 APAAHNFISN LITP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1117-1322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANKAQYQRAV QREYLMLKSS LPNGVVVRAY EDRMDLMSVM MVGPKRTPYQ NALFFFDFQF  60
   61 GRDYPKSPPV CHYISYCTDR LNPNLYEGGR VCVSLLGTWM GRDNEVWSPS STMLQVLVSI 120
  121 QGLILVDEPY YNEAGYEKQR GTQLGNENSR VYNEMAIIKI AQSTVKQLTN PPLIFRNELI 180
  181 EHFKEFGTEL YARMRAWSEY SLEAQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 2pwqA
Description: No description for 2pwqA was found.

Predicted Domain #8
Region A:
Residues: [1323-1398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNITKIKDMP VEYKASCELP EFPLLPCSRG FCIAVKRVLS QLQSELTALG ANLVTDERNG  60
   61 IATGIGTAPR AAPEEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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