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Protein Overview: wda-PA

General Information:
Name(s) found: wda-PA / FBpp0083779 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene will decrease acetylation is referred to in FlyBase by the symbol Dmel\wda (CG4448, FBgn0039067). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:19080792..19083779. It has the cytological map location 94E9. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: transcription regulator activity. There is experimental evidence that it is involved in the biological process</span>: histone acetylation. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: histone acetylation [IDA]
    regulation of transcription [IEA]
    Molecular Function: transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPSASNHA HAASPVYSNS NNNKSSASSK KTSSKNDLLR CAVGLLLKQK NYVSNERFRR  60
   61 SDFLLLQNKQ QFAVNKMLDT DLHGGNSFTF SNVQVITNNQ HTVDQQFGRF SQFVEAQAEP 120
  121 LRLEMKRFYG PMLCHFYLDL LKAREPRGAV ELLRKYAHLV APVDMYDAPP PTKINGCSTT 180
  181 ANESTFNIRF AKEAQDTGDT ELDYFMRLVQ TLSGYTRLEA AESDDTVAHF RSSKYELHTT 240
  241 AVVVNRICAY LQRRGHVLIM NLLYTWLHVH IVENEQRAFS EDHLLGLTDD LEGEDGEDDV 300
  301 VSKPAVTLNT RGDIRPSKSL TEKSNRKRPA EEPNIMLETD IKQEVETDES AELSKLQLNI 360
  361 DACLDTLKSA TEQILKSQVE LPRFLRISER SRGLTSAHLD PSECHMLAGF DNSAVQLWQL 420
  421 NQSYCRGKSF YRRYPQKRCP WELNNCANQE EETDEDSSDE DVKCSEEERR ERNRARHCKY 480
  481 ADNSYNEYGG FQLRGHTKGV TDVRFSAHYP LMYSVSKDAT MRCWRAHNLH CAAIYRSHNY 540
  541 PIWCLDESPV GQYVVTGSKD LSARLWSLEK EHALIIYAGH TQDVECVAFH PNGNYIATGS 600
  601 ADHSVRLWCA TSGKLMRVFA DCRQAVTQLA FSPDGKMLAA AGEETKVRIF DLAAGAQLAE 660
  661 LKDHSASISS LSWSTHNRHL ATACSDGTLR LWDIKKLSPM SDNSSAGSSS SATTNRVLTV 720
  721 NSSCQRLVDV FYGTSKTLYC IGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 23.09691 Structure of the apoptotic protease-activating factor 1 bound to ADP
    2 View Details [81..142] PSI-BLAST 14.221849 No description for 2nxpA was found.
    3 View Details [143..623] PSI-BLAST 11.69897 Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
    4 View Details [624..743] PSI-BLAST 73.30103 No description for 2ovpB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
  • hydrolase activity
    		•  0.320935567893193 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle