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View Structure Prediction Details

Protein: wda-PA
Organism: Drosophila melanogaster
Length: 743 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for wda-PA.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
686.0 [0..101] [740..1137]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPSASNHA HAASPVYSNS NNNKSSASSK KTSSKNDLLR CAVGLLLKQK NYVSNERFRR  60
   61 SDFLLLQNKQ QFAVNKMLDT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.09691
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [81-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLHGGNSFTF SNVQVITNNQ HTVDQQFGRF SQFVEAQAEP LRLEMKRFYG PMLCHFYLDL  60
   61 LK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.221849
Match: 2nxpA
Description: No description for 2nxpA was found.

Predicted Domain #3
Region A:
Residues: [143-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AREPRGAVEL LRKYAHLVAP VDMYDAPPPT KINGCSTTAN ESTFNIRFAK EAQDTGDTEL  60
   61 DYFMRLVQTL SGYTRLEAAE SDDTVAHFRS SKYELHTTAV VVNRICAYLQ RRGHVLIMNL 120
  121 LYTWLHVHIV ENEQRAFSED HLLGLTDDLE GEDGEDDVVS KPAVTLNTRG DIRPSKSLTE 180
  181 KSNRKRPAEE PNIMLETDIK QEVETDESAE LSKLQLNIDA CLDTLKSATE QILKSQVELP 240
  241 RFLRISERSR GLTSAHLDPS ECHMLAGFDN SAVQLWQLNQ SYCRGKSFYR RYPQKRCPWE 300
  301 LNNCANQEEE TDEDSSDEDV KCSEEERRER NRARHCKYAD NSYNEYGGFQ LRGHTKGVTD 360
  361 VRFSAHYPLM YSVSKDATMR CWRAHNLHCA AIYRSHNYPI WCLDESPVGQ YVVTGSKDLS 420
  421 ARLWSLEKEH ALIIYAGHTQ DVECVAFHPN GNYIATGSAD HSVRLWCATS GKLMRVFADC 480
  481 R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1n6dA
Description: Tricorn protease; Tricorn protease N-terminal domain; Tricorn protease domain 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.60409960326459 bayes_pls_golite062009
hydrolase activity 0.320935567893193 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [624-743]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAVTQLAFSP DGKMLAAAGE ETKVRIFDLA AGAQLAELKD HSASISSLSW STHNRHLATA  60
   61 CSDGTLRLWD IKKLSPMSDN SSAGSSSSAT TNRVLTVNSS CQRLVDVFYG TSKTLYCIGT 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle