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Protein Overview: CG5382-PB

General Information:
Name(s) found: CG5382-PB / FBpp0083630 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5382 (CG5382, FBgn0038950). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:18190261..18191703. It has the cytological map location 94A6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: dsRNA transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: dsRNA transport [IMP]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRL VTNQFCFEHR VNVCEHCMVQ SHPKCIVQSY LQWLRDSDYI SNCTLCGTTL  60
   61 EQGDCVRLVC YHVFHWDCLN ARQAALPANT APRGHQCPAC SVEIFPNANL VSPVADALKS 120
  121 FLSQVNWGRN GLGLALLSEE QSSSLKAIKP KVASQAAVSN MTKVHHIHSG GERERTKPNG 180
  181 HDAVSPHSVL LMDAFNPPSA GDYASSRRPL LPRQSPIGGT DRDDNKYQRR TPAELFSRWT 240
  241 RRFYAPSSRP PWRRTWFLVT AGILAFVLFV YLMAWLGRGG SDAVDEGWNN PNPQPNHYE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 5.522879 Cbl; N-terminal domain of cbl (N-cbl); CBL
    2 View Details [125..299] MSA 1.501996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.37191657566039 bayes_pls_golite062009
  • binding
    		•  1.77566644521435 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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