YRC Public Data Repository - Protein Structure Prediction

Protein:	CG5382-PB
Organism:	Drosophila melanogaster
Length:	299 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5382-PB.

Description	E-value	Query Range	Subject Range
ZFPL1_DROPS - Zinc finger protein-like 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18838 PE=3 SV=1 gi\|195145014, gi... - gi\|195145014\|ref\|XP_002013491.1\| GL24168 [Drosophila persimilis], gi\|194102434\|gb\|EDW24477.1\| GL2416... gi\|54638519, gi\|... - gi\|54638519\|gb\|EAL27921.1\| GA18838 [Drosophila pseudoobscura pseudoobscura], gi\|125775053\|ref\|XP_001...	354.0	[0..1]	[299..1]
CE21934 - status:Confirmed UniProt:Q9N4Y9 protein_id:AAF60574.1	342.0	[0..1]	[292..1]
ZFPL1_CAEBR - Zinc finger protein-like 1 homolog OS=Caenorhabditis briggsae GN=CBG06644 PE=3 SV=1	320.0	[0..1]	[292..1]
ZFPL1_DANRE - Zinc finger protein-like 1 OS=Danio rerio GN=zfpl1 PE=2 SV=1	312.0	[0..1]	[292..1]
gi\|58381126, gi\|... - gi\|58381126\|ref\|XP_311020.2\| ENSANGP00000019860 [Anopheles gambiae str. PEST], gi\|55243697\|gb\|EAA063...	306.0	[0..1]	[299..1]
ZFPL1_AEDAE - Zinc finger protein-like 1 homolog OS=Aedes aegypti GN=AAEL012105 PE=3 SV=1	291.0	[0..1]	[299..1]
gi\|47221837 - gi\|47221837\|emb\|CAG08891.1\| unnamed protein product [Tetraodon nigroviridis]	286.0	[0..1]	[292..1]
gi\|29840920 - gi\|29840920\|gb\|AAP05921.1\| similar to NM_024231 zinc finger like protein 1 [Schistosoma japonicum]	282.0	[0..1]	[296..1]
ZFPL1_XENTR - Zinc finger protein-like 1 OS=Xenopus tropicalis GN=zfpl1 PE=2 SV=1	277.0	[0..1]	[292..1]
ZFPL1 - zinc finger protein-like 1	263.0	[0..1]	[292..1]

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Predicted Domain #1

Region A:
Residues: [1-124]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRL VTNQFCFEHR VNVCEHCMVQ SHPKCIVQSY LQWLRDSDYI SNCTLCGTTL  60
   61 EQGDCVRLVC YHVFHWDCLN ARQAALPANT APRGHQCPAC SVEIFPNANL VSPVADALKS 120
  121 FLSQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.522879
Match:	1fbvA
Description:	Cbl; N-terminal domain of cbl (N-cbl); CBL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
protein binding	2.37191657566039	bayes_pls_golite062009
binding	1.77566644521435	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [125-299]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNWGRNGLGL ALLSEEQSSS LKAIKPKVAS QAAVSNMTKV HHIHSGGERE RTKPNGHDAV  60
   61 SPHSVLLMDA FNPPSAGDYA SSRRPLLPRQ SPIGGTDRDD NKYQRRTPAE LFSRWTRRFY 120
  121 APSSRPPWRR TWFLVTAGIL AFVLFVYLMA WLGRGGSDAV DEGWNNPNPQ PNHYE

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: