YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5382-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCKCPKRL VTNQFCFEHR VNVCEHCMVQ SHPKCIVQSY LQWLRDSDYI SNCTLCGTTL  60
   61 EQGDCVRLVC YHVFHWDCLN ARQAALPANT APRGHQCPAC SVEIFPNANL VSPVADALKS 120
  121 FLSQVNWGRN GLGLALLSEE QSSSLKAIKP KVASQAAVSN MTKVHHIHSG GERERTKPNG 180
  181 HDAVSPHSVL LMDAFNPPSA GDYASSRRPL LPRQSPIGGT DRDDNKYQRR TPAELFSRWT 240
  241 RRFYAPSSRP PWRRTWFLVT AGILAFVLFV YLMAWLGRGG SDAVDEGWNN PNPQPNHYE

Type	Start	End	Confidence
Cytoplasmic	1	254	0.84
Transmembrane Helix	255	275	0.94
Non-Cytoplasmic	276	299	0.80