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Protein Overview: RpI12-PA

General Information:
Name(s) found: RpI12-PA / FBpp0083564 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene RpI12 is referred to in FlyBase by the symbol Dmel\RpI12 (CG13418, FBgn0038903). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:17602558..17603510. It has the cytological map location 93F9. Based on sequence similarity, it is predicted to have molecular function</span>: DNA-directed RNA polymerase activity. It is reported to be involved in the biological process</span>: transcription from RNA polymerase I promoter. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 120 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase I complex [ISS][NAS]
    Biological Process: transcription from RNA polymerase I promoter [NAS]
    regulation of transcription [IEA]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [ISS][NAS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIFSNCPGF CPSCGSILPE LQVKGNVICY NCKKEFQPDV YSGEKSEFTI HFNTYDPSKV  60
   61 FNRTKRESES DADGPVVERK CPKCNHDKMS YATLQLRSAD EGQTVFFTCL KCKFKESENS 120
  121

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 20.221849 RBP9 subunit of RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle