General Information: |
|
Name(s) found: |
CG17838-PD /
FBpp0083369
[FlyBase]
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Description(s) found:
Found 18 descriptions. SHOW ALL |
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Organism: | Drosophila melanogaster |
Length: | 707 amino acids |
Gene Ontology: |
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Cellular Component: |
precatalytic spliceosome
[IDA]
heterogeneous nuclear ribonucleoprotein complex [ISS] |
Biological Process: |
nuclear mRNA splicing, via spliceosome
[IC]
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Molecular Function: |
nucleotide binding
[IEA]
nucleic acid binding [IEA] mRNA binding [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MLSQMEASKV QKDEGGGEAL SRTILKTPSS FRTPSPIPSC SKMAEGNGEL LDDINQKADD 60 61 RGDGERTEDY PKLLEYGLDK KVAGKLDEIY KTGKLAHAEL DERALDALKE FPVDGALNVL 120 121 GQFLESNLEH VSNKSAYLCG VMKTYRQKSR ASQQGVAAPA TVKGPDEDKI KKILERTGYT 180 181 LDVTTGQRKY GGPPPHWEGN VPGNGCEVFC GKIPKDMYED ELIPLFENCG IIWDLRLMMD 240 241 PMTGTNRGYA FVTFTNREAA VNAVRQLDNH EIKPGKCLKI NISVPNLRLF VGNIPKSKGK 300 301 DEILEEFGKL TAGLYEVIIY SSPDDKKKNR GFCFLEYESH KAASLAKRRL GTGRIKVWGC 360 361 DIIVDWADPQ EEPDEQTMSK VKVLYVRNLT QDVSEDKLKE QFEQYGKVER VKKIKDYAFI 420 421 HFEDRDSAVE AMRGLNGKEI GASNIEVSLA KPPSDKKKKE EILRARERRM MQMMQARPGI 480 481 VGNLSPTHPS IMSLTPMRPG ARMPLRTPIP REYDYFYDFF GFSDYRQGGS FGNNVSYYDD 540 541 MYRWIDGDYN YYDYPNGGGG GSGGGGGSVS GGTVLPLSAG GSQNSPMASG QRSARGSASG 600 601 PSASPSLMGV GRGHGITVPR GRVVGQRGSI SRLGAQTVPQ AAGAAAAAGQ AAAAVAQRGA 660 661 TGQGAPAATG GFRGVLPTRP SARGTQHVKP LQNLPAGAAF KTFMEGN |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..197] | ![]() |
2.180953 | View MSA. No confident structure predictions are available. |
2 | View Details | [198..285] | ![]() |
12.09691 | No description for 2dguA was found. |
3 | View Details | [286..366] | ![]() |
42.30103 | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
4 | View Details | [367..497] | ![]() |
3.47 | Solution structure of the second RNA binding domain from hypothetical protein BAB23448 |
5 | View Details | [498..549] | ![]() |
N/A | No confident structure predictions are available. |
6 | View Details | [550..707] | ![]() |
6.0 | Sec24 |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||
1 | No functions predicted. | |||||||||||||||
2 | No functions predicted. | |||||||||||||||
3 | No functions predicted. | |||||||||||||||
4 |
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5 | No functions predicted. | |||||||||||||||
6 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.96 |
Source: Reynolds et al. (2008)