Description(s) found:
SHOW ONLY BEST
|
gi|48428081|sp|Q8MSG8.2|APTX_DROME RecName: Full=Aprataxin-like protein
[NCBI NR]
gi|24648185|ref|NP_732421.1| CG5316, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|24648183|ref|NP_650805.1| CG5316, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|23171720|gb|AAN13800.1| CG5316, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|23171719|gb|AAF55666.2| CG5316, isoform B [Drosophila melanogaster]
[NCBI NR]
Aprataxin-like protein OS=Drosophila melanogaster GN=CG5316 PE=2 SV=2
[Swiss-Prot]
This gene is referred to in FlyBase by the symbol Dmel\CG5316 (CG5316, FBgn0038704). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:15229177..15232016. It has the cytological map location 92A3. Based on sequence similarity, it is predicted to have molecular function</span>: damaged DNA binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: single strand break repair. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides.
[FlyBase]
>CG5316-PC translation from_gene[CG5316 CG5316 FBgn0038704] seq_release:3 mol_weight=76478 cds_boundaries:(3R:15,229,409..15,231,738[+]) aa_length:662 transcript_info:[CG5316-RC seq_release:3] gene_info:[gene symbol:CG5316 FLAGGED_PROBLEMATIC FBgn00387
[hmr_yeast5_DM3-1_pombe.fasta]
>CG5316-PB translation from_gene[CG5316 CG5316 FBgn0038704] seq_release:3 mol_weight=76478 cds_boundaries:(3R:15,229,409..15,231,738[+]) aa_length:662 transcript_info:[CG5316-RB seq_release:3] gene_info:[gene symbol:CG5316 FLAGGED_PROBLEMATIC FBgn00387
[hmr_yeast5_DM3-1_pombe.fasta]
(Q9VDX2) CG5316-PB
[DrosMelano7227.FASTAC.txt]
CG5316-PC, isoform C [Drosophila melanogaster]gi|23171719|gb|AAF55666.2| CG5316-PB, isoform B [Drosophila melanogaster]gi|24648183|ref|NP_650805.1| CG5316-PB [Drosophila melanogaster]gi|24648185|ref|NP_732421.1| CG5316-PC [Drosophila melanogaster]gi|4
[nrdb_11152004_Chlamydomonas]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSE
[fly-100309-contam.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSE
[fly-100309-contam.fasta]
CG5316-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG5316-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
Protein aprataxin-like
[nr-271106-contam.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:join(15229392..15229544,15229615..15229840,15230023..15230471,15230564..15231724); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666,FlyMine:FBpp0083174,modMine:FBpp0083174; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666,FlyMine:FBpp0083174,modMine:FBpp0083174; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666,FlyMine:FBpp0083174,modMine:FBpp0083174; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FBpp0083172 type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0083174 type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666,FlyMine:FBpp0083174,modMine:FBpp0083174; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083172; name=CG5316-PC; parent=FBgn0038704,FBtr0083758; dbxref=FlyBase:FBpp0083172,FlyBase_Annotation_IDs:CG5316-PC,GB_protein:AAN13800.1,REFSEQ:NP_732421,GB_protein:AAN13800,UniProt/Swiss-Prot:Q8MSG8; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=3R:join(19403670..19403822,19403893..19404118,19404301..19404749,19404842..19406002); ID=FBpp0083174; name=CG5316-PB; parent=FBgn0038704,FBtr0083760; dbxref=FlyBase:FBpp0083174,FlyBase_Annotation_IDs:CG5316-PB,GB_protein:AAF55666.2,REFSEQ:NP_650805,GB_protein:AAF55666,UniProt/Swiss-Prot:Q8MSG8,FlyMine:FBpp0083174,modMine:FBpp0083174; MD5=8a7712446c83685a0b97b6c7e0aee363; length=662; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|