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View Structure Prediction Details

Protein: CG5316-PC, CG5316-PB
Organism: Drosophila melanogaster
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5316-PC, CG5316-PB.

Description E-value Query
Range
Subject
Range
gi|21430028 - gi|21430028|gb|AAM50692.1| GM01362p [Drosophila melanogaster]
522.0 [0..1] [662..1]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWSSALIKD ISKPENLIIS SEIAVVIADK FPKAQHHYLV LPLADIPSIF HLNRSHLSLL  60
   61 EELHLLARNV VEVKGVRWQD FNVGFHAEPS MQRLHLHVIS KDFVSTSLKT KKHWNSF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 1av5A
Description: Protein kinase C inhibitor-1, PKCI-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.12315862086587 bayes_pls_golite062009
nucleic acid binding 0.724655038971066 bayes_pls_golite062009
catalytic activity 0.096119422680995 bayes_pls_golite062009
protein binding 0.0635855651106229 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [118-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTELFVPYTK LYAQLEKENS ISRLPKSLKD ELLAKPLICN QCEFVARNLP SLKGHLVGHL  60
   61 QDPKSVCQRV RLGNQFFPTA GYRTSELAYC FDFVDFYEYK KQMEVDKLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.56
Match: 2yt9A
Description: No description for 2yt9A was found.

Predicted Domain #3
Region A:
Residues: [227-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIRDELQRKL NDKRNFLIES DRAVVMKADY PKSQYHFRVV AKEEFRDITQ LTEAQLPLLD  60
   61 HMMDLANQII EKQKHLESRN FLIGFKVNTF WNRLNLHVIS NDFYSMAMKR ISHWNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1xquA
Description: HIT family hydrolase from Clostridium thermocellum Cth-393
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.12315862086587 bayes_pls_golite062009
nucleic acid binding 0.724655038971066 bayes_pls_golite062009
catalytic activity 0.096119422680995 bayes_pls_golite062009
protein binding 0.0635855651106229 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [343-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNTELFMPFQ IAYMMLSVQG SIESISEETY NNLQEKTPLR CNQCEFVTNM LLDLKAHLYQ  60
   61 HWQRKEDERD QKKKVDKIIQ MISETKLDEA EAKPKLLNEE EPIQAQPVAA IAQYPNEHLG 120
  121 KPLTPQQQPG KQQAQNVYDK NINGPSVNMM NQNNPNNPFR NTPHLNRQSQ KPPHPRSGPR 180
  181 GPMAPWTGPR FPCHQQQNRF RPPGFNACRQ PYPPYHSGHQ QFPNASSVGG GQTGLPGQGQ 240
  241 GPRPKWNSNK IFNQQNRQNT VQAQPQAQNQ QTNQQQIQNS NKNQTPKKKP WKNRLQPVGK 300
  301 VQNQGGANRD PAPPSNSKPS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 1y0fA
Description: No description for 1y0fA was found.

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