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Protein Overview: CG5451-PA, FBpp0...

General Information:
Name(s) found: FBpp0293233 [FlyBase]
FBpp0293232 [FlyBase]
CG5451-PA / FBpp0083135 [FlyBase]
Description(s) found:
Found 32 descriptions.
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  • type=protein; loc=3R:complement(14804785..14804883,14804946..14806024,14806092..14806350,14806407..14806473,14806542..14806567); ID=FBpp0293233; name=Smu1-PC; parent=FBgn0038666,FBtr0304690; dbxref=REFSEQ:NP_001247190,GB_protein:AFH06508,FlyBase:FBpp0293233,FlyBase_Annotation_IDs:CG5451-PC; MD5=bc2e0288965aeecdf4a5d3f00b42eb16; length=509; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(14804785..14804883,14804946..14806024,14806092..14806350,14806407..14806473,14806542..14806567); ID=FBpp0293232; name=Smu1-PB; parent=FBgn0038666,FBtr0304689; dbxref=REFSEQ:NP_001247189,GB_protein:AFH06507,FlyBase:FBpp0293232,FlyBase_Annotation_IDs:CG5451-PB; MD5=bc2e0288965aeecdf4a5d3f00b42eb16; length=509; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5451 (CG5451, FBgn0038666). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14804697..14806829. It has the cytological map location 91E1-91E2. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIEIESADV IRLIQQYLKE SNLMKTLQTL QEETGVSLNT VDSVDGFVQD ISNGHWDTVL  60
   61 KVTQSLKLPD KKLLNLYEQI VLELIELREL GAARSLLRQT DPMTMLKQQE PERYIHLENM 120
  121 LQRAYFDPRE AYAEGSSKEK RRTVIAQELS GEVHVVPSSR LLALLGQALK WQQHQGLLPP 180
  181 GTTIDLFRGK AAMKDQEEEM YPTQLFRQIK FGQKSHVECA QFSPDGQYLI TGSVDGFLEV 240
  241 WNFTTGKVRK DLKYQAQDQF MMMEQAVLAL NFSRDSEMVA SGAQDGQIKV WRIITGQCLR 300
  301 KFEKAHTKGI TCLQFSRDNS QVLSASFDYT VRLHGLKSGK MLKEFKGHSS FVNEATFTPD 360
  361 GHSVLSASSD GTVKVWSLKT TECVATYKPL GNELAVNTVL ILPKNPEHFI VCNRSNTVVI 420
  421 MNMQGQIVRS FSSGKREGGA FISATLSPRG EFIYCAGEDQ VLYCFSVSSG KLERTLNVHE 480
  481 KDVIGLTHHP HQNLLASYSE DGLLKLWKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] FFAS03 1.03 N-terminal domain of Lissencephaly-1 protein (Lis-1)
    2 View Details [86..204] PSI-BLAST 26.69897 No description for 2pm9A was found.
    3 View Details [205..509] PSI-BLAST 81.69897 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle