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Protein Overview: CstF-64-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..189] PSI-BLAST 22.522879 NMR Structure of the N-terminal RRM domain of Cleavage stimulation factor 64 KDa subunit
2 View Details [190..263] deduced N/A No confident structure predictions are available.
3 View Details [264..419] PSI-BLAST 8.0 Sec24

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 5.15097136329571 bayes_pls_golite062009
  • mRNA binding
  • 4.05281507540116 bayes_pls_golite062009
  • nucleic acid binding
  • 3.81920018903278 bayes_pls_golite062009
  • 3.4479220904723 bayes_pls_golite062009
  • binding
  • 3.05116833253954 bayes_pls_golite062009
  • single-stranded RNA binding
  • 1.46469774223879 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.36691748240059 bayes_pls_golite062009
  • protein binding
  • 1.14508556628804 bayes_pls_golite062009
  • transcription regulator activity
  • 1.07788694919471 bayes_pls_golite062009
  • DNA binding
  • 0.978604858165557 bayes_pls_golite062009
  • snRNA binding
  • 0.73428616955527 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.591700155096213 bayes_pls_golite062009
  • transcription factor activity
  • 0.234742017105535 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle