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Protein Overview: CG7988-PA

General Information:
Name(s) found: CG7988-PA / FBpp0082983 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG7988 (CG7988, FBgn0038582). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14046248..14047195. It has the cytological map location 90F7. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: circadian rhythm. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: circadian rhythm [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSGEDFQV VTRKKWMARK CLRRRDRHKS ESDYLIDCPD VNVEKFQPRL ENLCTEMCQS  60
   61 DYFLVAMEAL QQQLEGIRKP LERIVCLGLG PFSRTYHALH QAAFVIGLHR HHKIREALYF 120
  121 DPVFRDSEKE LIRLFDGCIM SKDCAGKHEA TVPTLYYLPH CPYALMHNIL WSNWKRETLP 180
  181 NVFLISNSFE MLTMTPRNQD DHITRIVEHC TETPLEDDYE HHNVFNDLSL HTFPQESLPG 240
  241 SNDEAFWTRC APLKVNEDEL ITETETSLAA LKLESE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..145] Pfam 22.638272 No description for PF07985.3 was found. No confident structure predictions are available.
    3 View Details [146..276] MSA 3.051987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle