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Protein Overview: CG8925-PA

General Information:
Name(s) found: CG8925-PA / FBpp0082707 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG8925 (CG8925, FBgn0038404). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11997731..12006200. It has the cytological map location 89B6. Based on sequence similarity, it is predicted to have molecular function</span>: carnitine transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transmembrane transport. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 670 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    Molecular Function: carnitine transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVLRRGSL NFDCVGGPRD KGRGSLEANL YGGYRETRPG PKTPEISVIA LDFRRYSEDL  60
   61 KKPPSAEQTE QPPSRDLSQD EDSDVISNFL GHYTRWSFLW TLLLCLFQLP TTFHLFMFVF 120
  121 QLTDVRSGEA SPMLSDGNME NLDLLHTKLL ERLLGCLTPW QSMWCALLSI FQAICTFHIF 180
  181 VYVFQIAPKD FWCARPENLM QMSVSEWRNI SQSSNGCLLL DVDYTQVTYE NNQLINWPEN 240
  241 ATDLGYRQCW HFEFSDVDGS AKTLVQEFDL VCGRDILSLV ETCFLVGAAA GAVLSGWISD 300
  301 RFGRRHTLMA FVTIQSVFGG ILAFSTSVAM FMSLRVIIGF ASMTVTVVSF VLVVELVSGK 360
  361 WRTVIGILNI LPVAISYVLS AGLAYLIRDW RHLQLAISWP WLIMLSIWFW LPESPRWLLA 420
  421 QGRLDELCGL IERAARMNGT SASLPSNYRK TLEAAVPRAV QSPPEATTSV ESKAVEADAP 480
  481 DPSASGHVNP LLVVFSAKYW RTTCLTLVIW LTLIIIYFGL TLHLSNLGGN IYINSAVAGT 540
  541 VEAISICISI LVVLKVGIRR SLIGYMLLPG LCCLATNLVS NQTGVIALAT IAKCLIGANN 600
  601 AIIPTYTAMQ YPTIVRNFGV GMGNLASGIA LILVPFLWKL EHIDPLLPLN VMGVCGLIGA 660
  661 VAISLMKDVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] deduced N/A No confident structure predictions are available.
    2 View Details [225..670] PSI-BLAST 25.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • organic anion transmembrane transporter activity
    		•  3.3413526350788 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.25550149366993 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  0.312628600969375 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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