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Protein Overview: gi|24647339, gi|...

General Information:
Name(s) found: gi|24647339 [NCBI NR]
gi|23171435 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|24647339|ref|NP_732105.1| mini spindles [Drosophila melanogaster] [NCBI NR]
  • gi|23171435|gb|AAF55269.2| mini spindles [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 2049 amino acids

    Gene Ontology:
    Cellular Component: centrosome [NAS][TAS]
    spindle pole [NAS]
    microtubule associated complex [ISS][NAS]
    Biological Process: mitotic spindle elongation [IMP]
    female meiosis [IMP][TAS]
    oogenesis [IMP]
    bicoid mRNA localization [IMP]
    pronuclear fusion [IMP]
    mitosis [TAS]
    cytoplasmic microtubule organization [IMP]
    endoplasmic reticulum organization [IMP]
    microtubule-based process [ISS]
    oocyte microtubule cytoskeleton organization [IMP]
    Molecular Function: protein binding [IPI]
    microtubule binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDTEYKKL PVEERCVHKL WKARVDGYEE AAKIFRELDD EKSPEWSKFA GLIKKMVVDS  60
   61 NALAQEKGLE AALIFVENSG LAGRTVGDVM TGIVQKCIAA PKTKTKELSV QVALMYVEIE 120
  121 KQEAVVEELV KGMEAKNPKI VSACVAATTL ALREFGHKVI GVKPLIKKLA PLMSDRDKTV 180
  181 RDEGKQLAVE IYRWIGAAMK AQISTLPQVT LKELEDEFDK LKGERVEPSR YLKSQQEKQA 240
  241 KIADAAATED AYNEDDGEAG VEEIDPMDLL DPVDILSKMP KDFYDKLEEK KWTLRKESLE 300
  301 VLEKLLTDHP KLENGEYGAL VSALKKVITK DSNVVLVAMA GKCLALLAKG LAKRFSNYAS 360
  361 ACVPSLLEKF KEKKPNVVTA LREAIDAIYA STSLEAQQES IVESLSNKNP SVKSETALFI 420
  421 ARALTRTQPT ALNKKLLKLL TTSLVKTLNE PDPTVRDSSA EALGTLIKLM GDKAVTPLLA 480
  481 DVDPLKMAKI KECQEKAEIK IKVAGPKKET RPASAPTAKA AAPAKTVAGS VDPKPVTRPA 540
  541 TTGARKVLKK PATVSGGGAT SAPTAALKAG GKPLATEREI TPEELQEKSE EILPAEILNG 600
  601 LVDSNWKNRL AAVEQLLGEI SGFDAKQAGI SQILIRTISG RKPGLKEMNF QVLKFKLDII 660
  661 RSVAENYPLT TTTVDLVINE IIEKLADAKN GAAAADVLSA FAEATKLEYV VGKVLSFAFE 720
  721 QKSPKVQSEA FNWVNRSIIE FGFQLQPKTL IEDVRKGVQS TNPTVRASAI QMVGTMSMYM 780
  781 GKALMMFFDS EKPALKSQIQ VEFDKNVGEK PPKPVRGVQR SSGGTAGNSP DNEDDDGGAA 840
  841 GEEEPINMAD LLPRVDIAPQ ITEALLKEMS DKDWKTRNEG LTKLQAIISE ARLIKPSIGD 900
  901 LAPALAHRLV DSNAKIAQTT LAICEQLATA MGAGCRNHVR NLFPGFLHAL GDNKSFVRAA 960
  961 ALNCINSFGE KGGYKEFFES EMIADALKGG SPALKTELWA WLADKLPGLP PKSVSKEDIH1020
 1021 SMVPHLYAHI CDRNADVRKN ANEAVLGIMI HLGFDAMNRA LDKQKPASKK DILAALEKAR1080
 1081 PNLPVKPLPK GKHQAPIPEE PKLKTVRGGG AGGAPGIQKS ATARVAGGQD KQVPARKKDE1140
 1141 DIDTSPLLCA NSAKNQRLLD EQKMKVLKWT FVTPREEFTE LLRDQMMTAN VNKALIANMF1200
 1201 HDDFRYHLKV IEQLSEDLAG NSKALVCNLD LILKWLTLRF YDTNPSVLIK GLEYLVQVFQ1260
 1261 VLIDEEYILA ENEGSSFVPH LLLKANPKDA VRNGVRRVLR QVILVFPFVK VFGYVMEGLK1320
 1321 SKNARQRTEC LDELTFLIES YGMNICPQSA VREIARQISD RDNSVRNAAL NCIVQVFFLS1380
 1381 GEKTYKMIGH LNEKDLSMLD ERIKRAKKTK KPTPPPSVDV PAPQRHDSIE IEDAEVGNGC1440
 1441 DELPPPDEDG TFDQAPSSQL LLLQQQLQQL QQQAQQQKPS GPFGLDSQVI SEIEKDWVRV1500
 1501 DQMEQKPLLN VDISSLDEPI KVRPTRAGIH YPQEKFDRLI SRQHYMQQTL TTSPSSTAGM1560
 1561 TSGVSPYRSP MRLQHQQPQQ QLENNIPNLA DVLPKHDPQL VKVIKGVSST DTLKARAAIN1620
 1621 ELAAIIEAPE KQAVLRDYEE IFIQNVLAQF KNLSQIPSAQ SVVVYQPLLS ILYTFFHANI1680
 1681 LGKTLSVACI KNLMSALLNL MADPKLAVGD DSQYNKVING ICLKVLDKVD FTNLNCALIR1740
 1741 LLRETCPEAK LPKFTDLLMK CIWRNVKMLP ERSNELNYDA VILEVHEFML ALPSTWWQNR1800
 1801 PSDTPMRTIK TILHNMAKVK GNAILQHLNQ IPTHSELHTY LIRILKNFQK DGSASGIGAS1860
 1861 PQRAKEIASK RISHQTHDTV SQIFKLISDR DTKQQGLQKL YDFKQQNPDI DLSTFLQGSS1920
 1921 APFHKYIEEG LAEIERNQNA GSTQDNRTAA TRSYLTDVNY QNNGPDPDFW MDRLQYHMTG1980
 1981 GAAKLASARS ADDGSHMLDN KVVDENLCLN GMNAQKASLI KREKRDMSPN RLQHLQAKLA2040
 2041 QIKKENHAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..469] PSI-BLAST 27.30103 AP1 clathrin adaptor core
    2 View Details [470..561] deduced N/A No confident structure predictions are available.
    3 View Details [562..810] FFAS03 3.63 No description for 2of3A was found.
    4 View Details [811..1267] PSI-BLAST 9.221849 Mouse Importin alpha- phosphorylated SV40 CN peptide complex
    5 View Details [1268..1409] PSI-BLAST 21.69897 No description for 2of3A was found.
    6 View Details [1410..1510] deduced N/A No confident structure predictions are available.
    7 View Details [1511..1708] deduced N/A No confident structure predictions are available.
    8 View Details [1709..1862] deduced N/A No confident structure predictions are available.
    9 View Details [1863..1958] deduced N/A No confident structure predictions are available.
    10 View Details [1959..2049] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • protein transporter activity
    		•  2.91465420196082 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.61566088685247 bayes_pls_golite062009
  • binding
    		•  2.48958374349477 bayes_pls_golite062009
  • RNA binding
    		•  1.90677197622326 bayes_pls_golite062009
  • actin binding
    		•  1.76244772281676 bayes_pls_golite062009
  • protein binding
    		•  1.75981610748679 bayes_pls_golite062009
  • transporter activity
    		•  1.55621630624352 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.33334123659384 bayes_pls_golite062009
  • RNA cap binding
    		•  1.06062594463026 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  1.02389895825558 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.350388174853674 bayes_pls_golite062009
  • signal sequence binding
    		•  0.14931345687137 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.141331164449492 bayes_pls_golite062009
  • nuclear localization sequence binding
    		•  0.066884460149666 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle