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Protein Overview: CG3942-PA

General Information:
Name(s) found: CG3942-PA / FBpp0082033 [FlyBase]
Description(s) found:
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  • gi|7299586|gb|AAF54771.1| CG3942 [Drosophila melanogaster] [NCBI NR]
  • gi|24646223|ref|NP_650171.2| CG3942 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3942 (CG3942, FBgn0038008). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8079909..8082314. It has the cytological map location 87B4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: carbohydrate binding; glycerophosphodiester phosphodiesterase activity; phospholipase C activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: intracellular signaling cascade; glycerol metabolic process; lipid metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3942-PA translation from_gene[CG3942 CG3942 FBgn0038008] seq_release:3 mol_weight=85439 cds_boundaries:(3R:8,080,048..8,082,264[+]) aa_length:739 transcript_info:[CG3942-RA seq_release:3] gene_info:[gene symbol:CG3942 FBgn0038008 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VGB2) CG3942 protein [DrosMelano7227.FASTAC.txt]
  • (AE003695) CG3942 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3942-PA [Drosophila melanogaster]gi|24646223|ref|NP_650171.2| CG3942-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:8080029..8082248; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771; MD5=0970ab36847f6820da134c9059fc [fly-100309-contam.fasta]
  • CG3942-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:8080029..8082248; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:8080029..8082248; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3942 OS=Drosophila melanogaster GN=CG3942 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:8080029..8082248; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771,FlyMine:FBpp0082033,modMine:FBpp0082033; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG3942 OS=Drosophila melanogaster GN=CG3942-RA PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:12254307..12256526; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771,FlyMine:FBpp0082033,modMine:FBpp0082033; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:12254307..12256526; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771,FlyMine:FBpp0082033,modMine:FBpp0082033; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0082033 type=protein; loc=3R:12254307..12256526; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771,FlyMine:FBpp0082033,modMine:FBpp0082033; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:12254307..12256526; ID=FBpp0082033; name=CG3942-PA; parent=FBgn0038008,FBtr0082561; dbxref=FlyBase:FBpp0082033,FlyBase_Annotation_IDs:CG3942-PA,GB_protein:AAF54771.1,REFSEQ:NP_650171,GB_protein:AAF54771,UniProt/TrEMBL:Q9VGB2,FlyMine:FBpp0082033,modMine:FBpp0082033; MD5=0970ab36847f6820da134c9059fcb266; length=739; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 739 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycerol metabolic process [IEA]
    intracellular signaling pathway [IEA]
    lipid metabolic process [IEA]
    Molecular Function: phospholipase C activity [IEA]
    carbohydrate binding [IEA]
    glycerophosphodiester phosphodiesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRWFFANER EECERKPEED GPSSASETQE PPPPPPVPTT EWPFCVVFHS SLNGNEYVAI  60
   61 SGNCPSLGNW DPKEVYILAK NDCISCLCNC RQFEASLEIP RNIDIHYRYC VVIHDPETDE 120
  121 VYIRFWESQL YPRVIRTCQN MLKNCDVFGK PHDDDEANQV DRGWATTETI VHLKIFNAPF 180
  181 CWQRQKPRLL YVHVQPMFEV PENPCNEPAN PIKMVSSQTR LSRYLSTREI KAGNQYLQLA 240
  241 QVEVTNLCVQ NALAAQQRFG ARCGPKDMEL FHCSIAFPEE TLYRLDLYTY AHKAGYDEPP 300
  301 YHYGYGFLMP DQLLGTEGSA RVKITCASTH RPLMEMCVRY LIIRPLPNFR CDLSHSYERY 360
  361 WRKNRLCMNI GHKGSGNTYR LGSDVVRENT LYGFKQAVLA NADMVEMDVQ LTQDAQVVVY 420
  421 HDFVLRFMLQ RMPSFEDLLE NQDLLIFAYE NLNKLMLLAM GGSKRKDLIA VPLEAFSYDQ 480
  481 LKEVKVLRFA GSKGCDKSCD RMLLEQRPFP LLLDLLDEEN LPVDMGFLIE IKWPQMTNMR 540
  541 RWESGSFKPT FDRNFYVDTI LEIVLNKAGK RRIVFCSFDA DICAMVRFKQ NVYPVTLLLE 600
  601 DPHSPVQYAD QRVSVQDVAV RFCNSLEFLG LTLHANSLLN KPSTMAYLHQ INLDAFVYGS 660
  661 STIDLEIRNK LKKHGVLGII YDRLDQLDQV GEELEGDTMC TIDSVTTRRV IQETEVEEWI 720
  721 QKCGYKPETS IVVHNIYID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 33.69897 SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY
    2 View Details [148..346] deduced N/A No confident structure predictions are available.
    3 View Details [347..739] PSI-BLAST 50.522879 Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.322782393124324 bayes_pls_golite062009
  • hydrolase activity
    		•  0.114597543302679 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.10444517300189 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.0391669406455814 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  0.0229452028027644 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle