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View Structure Prediction Details

Protein: CG3942-PA
Organism: Drosophila melanogaster
Length: 739 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3942-PA.

Description E-value Query
Range
Subject
Range
gi|19527767 - gi|19527767|gb|AAL89998.1| AT04656p [Drosophila melanogaster]
624.0 [0..1] [739..1]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRWFFANER EECERKPEED GPSSASETQE PPPPPPVPTT EWPFCVVFHS SLNGNEYVAI  60
   61 SGNCPSLGNW DPKEVYILAK NDCISCLCNC RQFEASLEIP RNIDIHYRYC VVIHDPETDE 120
  121 VYIRFWESQL YPRVIRTCQN MLKNCDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1cgwA
Description: SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [148-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGKPHDDDEA NQVDRGWATT ETIVHLKIFN APFCWQRQKP RLLYVHVQPM FEVPENPCNE  60
   61 PANPIKMVSS QTRLSRYLST REIKAGNQYL QLAQVEVTNL CVQNALAAQQ RFGARCGPKD 120
  121 MELFHCSIAF PEETLYRLDL YTYAHKAGYD EPPYHYGYGF LMPDQLLGTE GSARVKITCA 180
  181 STHRPLMEMC VRYLIIRPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [347-739]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNFRCDLSHS YERYWRKNRL CMNIGHKGSG NTYRLGSDVV RENTLYGFKQ AVLANADMVE  60
   61 MDVQLTQDAQ VVVYHDFVLR FMLQRMPSFE DLLENQDLLI FAYENLNKLM LLAMGGSKRK 120
  121 DLIAVPLEAF SYDQLKEVKV LRFAGSKGCD KSCDRMLLEQ RPFPLLLDLL DEENLPVDMG 180
  181 FLIEIKWPQM TNMRRWESGS FKPTFDRNFY VDTILEIVLN KAGKRRIVFC SFDADICAMV 240
  241 RFKQNVYPVT LLLEDPHSPV QYADQRVSVQ DVAVRFCNSL EFLGLTLHAN SLLNKPSTMA 300
  301 YLHQINLDAF VYGSSTIDLE IRNKLKKHGV LGIIYDRLDQ LDQVGEELEG DTMCTIDSVT 360
  361 TRRVIQETEV EEWIQKCGYK PETSIVVHNI YID

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.522879
Match: 1t8qA
Description: Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.322782393124324 bayes_pls_golite062009
hydrolase activity 0.114597543302679 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.10444517300189 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0391669406455814 bayes_pls_golite062009
phosphoric diester hydrolase activity 0.0229452028027644 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle