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Protein Overview: Spt3-PA

General Information:
Name(s) found: Spt3-PA / FBpp0082011 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Spt3 is referred to in FlyBase by the symbol Dmel\Spt3 (CG3169, FBgn0037981). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7842822..7844272. It has the cytological map location 87A5. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity; general RNA polymerase II transcription factor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: transcription initiation from RNA polymerase II promoter; regulation of transcription. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    transcription factor TFIID complex [ISS]
    SAGA complex [NAS]
    histone acetyltransferase complex [ISS]
    Biological Process: regulation of transcription [ISS]
    transcription initiation from RNA polymerase II promoter [ISS]
    Molecular Function: transcription factor activity [ISS]
    general RNA polymerase II transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYNAKRVMR QNSVCVGSND MAASPIMIGP APPSAPSTPQ LQTTEDIKPL LVQRQVILLQ  60
   61 SGSIPTNPSP QQINLAGHNV AGGASGSNVA NVLIPDDAPV SLLTEIADIM RSFGDSDQPR 120
  121 TGSVKLVEQI LQQQLRGIFN EASLVAMRRK QNPCPSQADF EFLMRNHPVK IARMRKHLKD 180
  181 MRILKRFLSI RTGRPQDFMD DLEQQEEDEE LAIDVYELHD EDRMRRLFRA DRISQILTGQ 240
  241 QYLEFNEARK TSFYCRHGEK IKNKFRRFLD LPADLRIPTP TMNILAYLAH ETIAAIVDYS 300
  301 ILTRLNSDNR ATEPYSRVTS AGGSPAMMHV CPEVTQGRGM EVVKPISVPE IHEAMRRFRQ 360
  361 MSSRKIGRYR NSCDIDFRRS FLAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A No confident structure predictions are available.
    2 View Details [95..192] Pfam 3.886057 No description for PF02269.7 was found. No confident structure predictions are available.
    3 View Details [193..384] FFAS03 1.29 TAF(II)28

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • nucleic acid binding
    		•  4.14026521609645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle