| Protein: | Spt3-PA |
| Organism: | Drosophila melanogaster |
| Length: | 384 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Spt3-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
450.0 | [0..1] | [384..43] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MNYNAKRVMR QNSVCVGSND MAASPIMIGP APPSAPSTPQ LQTTEDIKPL LVQRQVILLQ 60
61 SGSIPTNPSP QQINLAGHNV AGGASGSNVA NVLI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [95-192] |
1 11 21 31 41 51
| | | | | |
1 PDDAPVSLLT EIADIMRSFG DSDQPRTGSV KLVEQILQQQ LRGIFNEASL VAMRRKQNPC 60
61 PSQADFEFLM RNHPVKIARM RKHLKDMRIL KRFLSIRT
|
| Detection Method: | |
| Confidence: | 3.886057 |
| Match: | PF02269.7 |
| Description: | No description for PF02269.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [193-384] |
1 11 21 31 41 51
| | | | | |
1 GRPQDFMDDL EQQEEDEELA IDVYELHDED RMRRLFRADR ISQILTGQQY LEFNEARKTS 60
61 FYCRHGEKIK NKFRRFLDLP ADLRIPTPTM NILAYLAHET IAAIVDYSIL TRLNSDNRAT 120
121 EPYSRVTSAG GSPAMMHVCP EVTQGRGMEV VKPISVPEIH EAMRRFRQMS SRKIGRYRNS 180
181 CDIDFRRSFL AI
|
| Detection Method: | |
| Confidence: | 1.29 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 4.14026521609645 | bayes_pls_golite062009 |
