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Protein Overview: CG6783-PC

General Information:
Name(s) found: CG6783-PC / FBpp0099728 [FlyBase]
Description(s) found:
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  • gi|78706752|ref|NP_001027179.1| CG6783, isoform C [Drosophila melanogaster] [NCBI NR]
  • ref|NP_731588.1| CG31305-PJ [Drosophila melanogaster] [NCBI NR]
  • gi|23171009|gb|AAN13511.1| CG6783, isoform C [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6783 (CG6783, FBgn0037913). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:7385612..7392771. It has the cytological map location 86E10. Based on sequence similarity, it is predicted to have molecular function</span>: fatty acid binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG31305-PJ translation from_gene[CG31305 CG31305 FBgn0051305] seq_release:3 mol_weight=17138 cds_boundaries:(3R:7,386,817..7,392,727[-]) aa_length:157 transcript_info:[CG31305-RJ seq_release:3] gene_info:[gene symbol:CG31305 FBgn0051305 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8INK3) CG31305-PJ [DrosMelano7227.FASTAC.txt]
  • CG31305-PJ, isoform J [Drosophila melanogaster]gi|24645977|ref|NP_731588.1| CG31305-PJ [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(7386796..7386927,7390162..7390433,7392640..7392709); ID=FBpp0099728; name=CG6783-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_p [fly-100309-contam.fasta]
  • CG6783-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(7386796..7386927,7390162..7390433,7392640..7392709); ID=FBpp0099728; name=CG6783-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(7386796..7386927,7390162..7390433,7392640..7392709); ID=FBpp0099728; name=CG6783-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6783, isoform C OS=Drosophila melanogaster GN=fabp PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(7386796..7386927,7390162..7390433,7392640..7392709); ID=FBpp0099728; name=fabp-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511,FlyMine:FBpp0099728,modMine:FBpp0099728; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(11566918..11566987,11564440..11564711,11561074..11561205)); ID=FBpp0099728; name=fabp-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511,FlyMine:FBpp0099728,modMine:FBpp0099728; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(11566918..11566987,11564440..11564711,11561074..11561205)); ID=FBpp0099728; name=fabp-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511,FlyMine:FBpp0099728,modMine:FBpp0099728; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Fatty acid bindin protein, isoform C OS=Drosophila melanogaster GN=fabp PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0099728 type=protein; loc=3R:complement(join(11566918..11566987,11564440..11564711,11561074..11561205)); ID=FBpp0099728; name=fabp-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511,FlyMine:FBpp0099728,modMine:FBpp0099728; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(11566918..11566987,11564440..11564711,11561074..11561205)); ID=FBpp0099728; name=fabp-PC; parent=FBgn0037913,FBtr0100323; dbxref=FlyBase_Annotation_IDs:CG6783-PC,FlyBase:FBpp0099728,GB_protein:AAN13511.1,REFSEQ:NP_001027179,GB_protein:AAN13511,UniProt/TrEMBL:Q8INK3,FlyMine:FBpp0099728,modMine:FBpp0099728; MD5=018876477e4aae9423291f9f89aabc1f; length=157; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 157 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transport [IEA]
    Molecular Function: fatty acid binding [ISS]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVGKKYKL DKSENFDEYM KELGVGLVTR KMGNSLSPTV EVTLEGDTYT LTTTSTFKTS  60
   61 AISFKLGVEF DEETLDGRNV KSIITLDGNK LTQEQKGDKP TTIVREFTDN ELITLIPHLT 120
  121 PSQHGSLRLR VPCQPVPPTS VDDGARSGGC GQRPGGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 40.69897 No description for 2hnxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • long-chain fatty acid transporter activity
    		•  4.03130183716737 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  3.78208104687342 bayes_pls_golite062009
  • binding
    		•  2.29841525021754 bayes_pls_golite062009
  • lipid transporter activity
    		•  1.7304520084656 bayes_pls_golite062009
  • protein binding
    		•  1.23450129884619 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.23390314423406 bayes_pls_golite062009
  • prostaglandin-D synthase activity
    		•  1.18764036773412 bayes_pls_golite062009
  • lipid binding
    		•  1.0002255159651 bayes_pls_golite062009
  • transporter activity
    		•  0.902095346683958 bayes_pls_golite062009
  • fatty acid binding
    		•  0.761923641769607 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.585313740790474 bayes_pls_golite062009
  • retinoid binding
    		•  0.451050759082675 bayes_pls_golite062009
  • isoprenoid binding
    		•  0.394662096985878 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle