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Protein Overview: CG18005-PA

General Information:
Name(s) found: CG18005-PA / FBpp0081475 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG18005 (CG18005, FBgn0037660). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4888854..4890819. It has the cytological map location 85C4. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAHLEAPP SVRLTNDDFR KLLATPRAPP PGSGTSSTSA GGSLATATFA TPSTAPGTTG  60
   61 LSGEKKKGQS SSERNDLRRK KKNFYAALKK QEDVKLQELS EKYRDRARER RDGANPDYVN 120
  121 VSTPGHGSST NAYRAVAPDM KSGIDAQERR RRIIQESKFL GGDIQHTHLV KGLDYALLQK 180
  181 VRSELHSKEA EEEEIAAAVA REKLAEAAAA AEQLEAERRE SEDINAINGA LARNIYNLVQ 240
  241 ARRSKEVPRN ELFAPGRMAY VIDLDDELGE SDIPTTLKRS KFEVPVSQED VATLTTNDIV 300
  301 INKLSQILSY LRAGGRNKKN KKRDKDKPLF YEKEVENLRG SSSNGGSSRH ATSSSSNMGG 360
  361 KSAPLGDNIY DDIGDYQPSA TRPERNRQEQ GKSAPSYFGD GPPEASEEPI ISSIPPPPKI 420
  421 SKAMAARFAE PEGYAECYPG LEEMNDAIDD SDDEVDYTKM DLGNKKGPIG RWDFDTQEEY 480
  481 SDYMSTKEAL PKAAFQYGVK MQDGRKTRKN KTEKNEKAEL DREWQKIQTI IQKRKLPKDG 540
  541 GGGGAGGDEP DYKSAKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] deduced N/A No confident structure predictions are available.
    2 View Details [77..272] PSI-BLAST 3.221849 No description for 2dfsA was found.
    3 View Details [273..363] deduced N/A No confident structure predictions are available.
    4 View Details [364..557] MSA 3.069966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle