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Protein Overview: stck-PC

General Information:
Name(s) found: stck-PC / FBpp0081336 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene steamer duck is referred to in FlyBase by the symbol Dmel\stck (CG7954, FBgn0020249). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4182689..4185745. It has the cytological map location 84F15. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: dorsal closure; apposition of dorsal and ventral imaginal disc-derived wing surfaces; embryonic pattern specification; negative regulation of JNK cascade; head involution. 14 alleles are reported. The phenotypes of these alleles are annotated with: larva; embryonic somatic muscle; embryonic/larval somatic muscle. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: cell leading edge [IDA]
    Biological Process: dorsal closure [IMP]
    embryonic pattern specification [IMP]
    head involution [IMP]
    apposition of dorsal and ventral imaginal disc-derived wing surfaces [IMP]
    negative regulation of JNK cascade [IGI]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMYSKAEVVQ AANMSLGAMH CTRCADGFEP TEKIVNSNGE LWHTQCFVCA QCFRPFQDGI  60
   61 FYEFEGRKYC ERDFHVLFAP CCNKCGEFVI GRVIKAMSAS WHPQCFRCQL CAKELADCGF 120
  121 IKNQNRALCH ECNAKVKAEI TGRYVCQKCH GLIDEEPLRF RGEVYHGYHF SCTACGTELD 180
  181 STAREVKSRP GLAANDMNEL YCLRCHDKMG IPICGACRRP IEERVVTALG KHWHVEHFVC 240
  241 AKCEKPFLGH RHYEKRGLAY CETHYHQLFG NLCFVCNQVI GGDVFTALNK AWCVHHFACS 300
  301 VCDTKMTQKS KFYEYDEKPV CKKCYDRFPN ELRRRLRTAH EMTMKKNT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 45.522879 No description for 2i13A was found.
    2 View Details [192..348] PSI-BLAST 14.045757 ZIF268


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle