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Protein Overview: CG1965-PA

General Information:
Name(s) found: CG1965-PA / FBpp0081148 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1965 (CG1965, FBgn0037466). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2893134..2897346. It has the cytological map location 84B2. Based on sequence similarity, it is predicted to have molecular function</span>: DNA binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: regulation of transcription. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 905 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: regulation of transcription [IEA]
    nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFRKPKKI QRRVFSSNAD EEEDGASLDP DAEMEAPPPP IISGKREKEK SRKAIKPQED  60
   61 NSKPKALLSF ADDEDDGEVF QVRKSSHSKK VMRMLDKERR KKKREERAEN SGHPGGENGS 120
  121 TQHLESSGGP SSGPPNSNSN PANAGRYKSA SDQSKSKKSD NHMIQTEIRT DDFVLVVKKS 180
  181 ETPEAILNGR AALCAGREDM SDEEDQQSED GGHDKTRHRF SKPEHLKQML ESGSIPDAAM 240
  241 IHAARKRRQR AREQGAGDYI PIEEPKEPAK LSNRLPCEDV EGDQSDDEER MDMNDITGRK 300
  301 EREERREQFY AVENDSTDGD SDREMNEWEN QQIRKGVTAA QLVHSQHETV LSRFMIKPAP 360
  361 SGIGTGMDDG DSTAAQSTST LLEQAYAKNA LERTNLAAAV RSSVKTKKEK AKATALRTPQ 420
  421 EILAAIQSRL SELKERSADH SASMARISTE LKALKLQQLE CQQNAPTAAA KYKFYQEIKC 480
  481 YVNDLVDCLS EKAPVIYDLE KRALQQYGKN QRYLVNRRRQ DVRDQAKEIA ESAKPITAAS 540
  541 RRTPDYEEQV RRAAEREGRR TRRRCERERN DLLSSHLDGM SSDDEIADQQ QELSVTTMAQ 600
  601 IESQSVDALE DVTDDFSKIE LILMKFFAWR KTDMSSYQDA FVSLCLPKVL APLVRHELVL 660
  661 WSPLLDVYAD IENMRWYQAC MLYASQADET VEQLKIDPDI NLVPALIEKI VLPKVTALVT 720
  721 ECWDPLSTTQ TLRLVGFINR LGREFPLSGT NKQLNKLFES IMERMRLALE NDVFIPIFPK 780
  781 QVQEAKTSFF QRQFCSGLKL FRNFLSWQGI LADKLLRELA IGALLNRYLL LAMRVCTPND 840
  841 AINKAYIIVN TLPTVWLLPN SETLKNMELF IGYIKQTLEN CDASNPIFMQ SSDKAKQILQ 900
  901 RLHSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..417] PSI-BLAST 23.39794 Heavy meromyosin subfragment
    2 View Details [418..491] PSI-BLAST 5.69897 No description for 2i1jA was found.
    3 View Details [492..667] deduced N/A No confident structure predictions are available.
    4 View Details [668..808] MSA 1.056978 View MSA. No confident structure predictions are available.
    5 View Details [809..905] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle