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Protein Overview: Ama-PA, Ama-PC

General Information:
Name(s) found: Ama-PC / FBpp0081137 [FlyBase]
Ama-PA / FBpp0081136 [FlyBase]
Description(s) found:
Found 42 descriptions.
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  • The gene Amalgam is referred to in FlyBase by the symbol Dmel\Ama (CG2198, FBgn0000071). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2588315..2590983. It has the cytological map location 84A5. It is reported to have molecular function</span>: antigen binding. It is reported to be involved in the biological process</span>: cell adhesion. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene Amalgam is referred to in FlyBase by the symbol Dmel\Ama (CG2198, FBgn0000071). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2588315..2590983. It has the cytological map location 84A5. It is reported to have molecular function</span>: antigen binding. It is reported to be involved in the biological process</span>: cell adhesion. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 333 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA][ISS]
    Biological Process: cell adhesion [NAS]
    Molecular Function: antigen binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLRLLIGL IFCLAISLDS VLSAPVISQI SKDVVASVGD SVEFNCTVEE VGQLSVSWAK  60
   61 RPSESDTNSV VLSMRNILSL PDQRYNVTVT EGPKTGSAIY TFRIQNIEVS DMGPYECQVL 120
  121 VSATEKVTKK LSLQIKTPPV IAENTPKSTL VTEGQNLELT CHANGFPKPT ISWAREHNAV 180
  181 MPAGGHLLAE PTLRIRSVHR MDRGGYYCIA QNGEGQPDKR LIRVEVEFRP QIAVQRPKIA 240
  241 QMVSHSAELE CSVQGYPAPT VVWHKNGVPL QSSRHHEVAN TASSSGTTTS VLRIDSVGEE 300
  301 DFGDYYCNAT NKLGHADARL HLFQTVIPVP SLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..333] PSI-BLAST 36.69897 Axonin-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.33804459527604 bayes_pls_golite062009
  • receptor activity
    		•  1.90298241148243 bayes_pls_golite062009
  • signal transducer activity
    		•  1.59395248964472 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.59395248964472 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.5023290800351 bayes_pls_golite062009
  • fibroblast growth factor 1 binding
    		•  1.39482409678992 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  1.36789541796983 bayes_pls_golite062009
  • fibroblast growth factor receptor activity
    		•  1.13671712991988 bayes_pls_golite062009
  • protein binding
    		•  1.0782734177126 bayes_pls_golite062009
  • fibroblast growth factor binding
    		•  0.646668003618218 bayes_pls_golite062009
  • integrin binding
    		•  0.599569390248921 bayes_pls_golite062009
  • IgG binding
    		•  0.16605827100416 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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