| Protein: | Ama-PA, Ama-PC |
| Organism: | Drosophila melanogaster |
| Length: | 333 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ama-PA, Ama-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..1] | [333..9] |
|
Region A: Residues: [1-333] |
1 11 21 31 41 51
| | | | | |
1 MARLRLLIGL IFCLAISLDS VLSAPVISQI SKDVVASVGD SVEFNCTVEE VGQLSVSWAK 60
61 RPSESDTNSV VLSMRNILSL PDQRYNVTVT EGPKTGSAIY TFRIQNIEVS DMGPYECQVL 120
121 VSATEKVTKK LSLQIKTPPV IAENTPKSTL VTEGQNLELT CHANGFPKPT ISWAREHNAV 180
181 MPAGGHLLAE PTLRIRSVHR MDRGGYYCIA QNGEGQPDKR LIRVEVEFRP QIAVQRPKIA 240
241 QMVSHSAELE CSVQGYPAPT VVWHKNGVPL QSSRHHEVAN TASSSGTTTS VLRIDSVGEE 300
301 DFGDYYCNAT NKLGHADARL HLFQTVIPVP SLS
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 1cs6A |
| Description: | Axonin-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.33804459527604 | bayes_pls_golite062009 |
| receptor activity | 1.90298241148243 | bayes_pls_golite062009 |
| signal transducer activity | 1.59395248964472 | bayes_pls_golite062009 |
| molecular transducer activity | 1.59395248964472 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.5023290800351 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 1.39482409678992 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 1.36789541796983 | bayes_pls_golite062009 |
| fibroblast growth factor receptor activity | 1.13671712991988 | bayes_pls_golite062009 |
| protein binding | 1.0782734177126 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 0.646668003618218 | bayes_pls_golite062009 |
| integrin binding | 0.599569390248921 | bayes_pls_golite062009 |
| IgG binding | 0.16605827100416 | bayes_pls_golite062009 |
