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Protein Overview: mRpL44-PA

General Information:
Name(s) found: mRpL44-PA / FBpp0078415 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene mitochondrial ribosomal protein L44 is referred to in FlyBase by the symbol Dmel\mRpL44 (CG2109, FBgn0037330). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1295185..1296382. It has the cytological map location 83A4. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: RNA processing [IEA]
    Molecular Function: RNA binding [IEA]
    ribonuclease III activity [IEA]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLRSAVGL LARVKLLEGS PTVQTRRHIK RWVSPTLREL AHRQKKLGPQ KPERRSGFVE  60
   61 WNQRSELFAF GKRLGESFEL SELQRAFTEK SFAEREEDRR RQLGIEESDL QMPHNSDLVE 120
  121 KGQQIARAYV EAFLQHQLPK VPNEGLQAIA SYLLSTETLA HVSTHLGTKD LIQSTEYPPS 180
  181 AESQAKSLHA VIGALASSSG IERAFIFVRD FICTQLNQKD LLEVWTPQEP IQLLEKICQE 240
  241 RKLGEAEPRL LGDCGKNTVL AAYQVGIYAN RQLLGKGFGE DVKTATETAA LDALQSIFDT 300
  301 RDNRRPFDFA IQLEPKTVRL G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 44.0 RNase III endonuclease catalytic domain; RNase III, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  3.47936258035029 bayes_pls_golite062009
  • structural molecule activity
    		•  3.24253353258704 bayes_pls_golite062009
  • RNA binding
    		•  2.07194221617317 bayes_pls_golite062009
  • binding
    		•  1.4876976529018 bayes_pls_golite062009
  • ribonuclease activity
    		•  1.18950533032179 bayes_pls_golite062009
  • nuclease activity
    		•  0.968474121998323 bayes_pls_golite062009
  • endonuclease activity
    		•  0.859465619689044 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.580384932372417 bayes_pls_golite062009
  • protein binding
    		•  0.225297926918328 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.191902425146983 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle