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Protein Overview: FBpp0306925, Hus...

General Information:
Name(s) found: FBpp0306925 [FlyBase]
Hus1-like-PA / FBpp0078516 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=3R:complement(634145..634981); ID=FBpp0306925; name=Hus1-like-PB; parent=FBgn0026417,FBtr0334904; dbxref=FlyBase:FBpp0306925,FlyBase_Annotation_IDs:CG2525-PB,REFSEQ:NP_001262267,GB_protein:AGB95650; MD5=5803f8be5816d8c362fa0a4bff18f8a3; length=278; release=r5.56; species=Dmel; [FlyBase]
  • The gene Hus1-like is referred to in FlyBase by the symbol Dmel\Hus1-like (CG2525, FBgn0026417). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:634084..637783. It has the cytological map location 82D6. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: DNA repair. 9 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISS]
    S phase of meiotic cell cycle [IMP]
    response to DNA damage stimulus [IMP]
    female pronucleus assembly [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRALMQDP LYMKEFQAIV ATLTKLAKDC VMILGSRQMH FIVNEDQSSA ASPLVWAGIT  60
   61 AEEYFPEYRM EAAHPDQEYI VLGVSSANLG RALSVLRGGG VNSCKLKLQR IQFPCISVIA 120
  121 SVLTSSSTEA REVVHDVPVT IIPGSDWSAY VVPRVPNSQL ALGLPSLRLL KSLIDKLKNI 180
  181 SPSLEFQVNV DGELNVIATS EMSTVTSRFQ KLLIRTVSGS QQEASCSVDS RKASAFFGAL 240
  241 QLPNEELTIG IDREHSIHLQ IDVRQDVVLH SILPAVCM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] FFAS03 2.25 Prolifirating cell nuclear antigen (PCNA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA polymerase activity
    		•  3.56942073327682 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
    		•  3.5639869830462 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.87097316781119 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  2.40402506622621 bayes_pls_golite062009
  • DNA binding
    		•  2.04318251261279 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.01144876655621 bayes_pls_golite062009
  • binding
    		•  1.89545142352738 bayes_pls_golite062009
  • transferase activity
    		•  1.70595878959175 bayes_pls_golite062009
  • catalytic activity
    		•  0.474398499157949 bayes_pls_golite062009
  • protein binding
    		•  0.455721709236539 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.214228884882506 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle