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Protein Overview: CG9769-PA

General Information:
Name(s) found: CG9769-PA / FBpp0078532 [FlyBase]
Description(s) found:
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  • gi|74948259|sp|Q9VN50.1|EI3F1_DROME RecName: Full=Eukaryotic translation initiation factor 3 subunit F-1; Short=eIF3f-1; AltName: Full=Eukaryotic translation initiation factor 3 subunit 5-1 [NCBI NR]
  • gi|7296825|gb|AAF52101.1| CG9769 [Drosophila melanogaster] [NCBI NR]
  • gi|24644059|ref|NP_649489.1| CG9769 [Drosophila melanogaster] [NCBI NR]
  • gi|21430308|gb|AAM50832.1| LD47792p [Drosophila melanogaster] [NCBI NR]
  • Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila melanogaster GN=eIF3-S5-1 PE=2 SV=1 [Swiss-Prot]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9769 (CG9769, FBgn0037270). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:538861..539918. It has the cytological map location 82D2. Based on sequence similarity, it is predicted to have molecular function</span>: translation initiation factor activity. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9769-PA translation from_gene[CG9769 CG9769 FBgn0037270] seq_release:3 mol_weight=31105 cds_boundaries:(3R:538,967..539,806[-]) aa_length:280 transcript_info:[CG9769-RA seq_release:3] gene_info:[gene symbol:CG9769 FBgn0037270 gene_boundaries:(3R:538 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VN50) CG9769 protein (LD47792p) [DrosMelano7227.FASTAC.txt]
  • (AE003605) CG9769 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9769-PA [Drosophila melanogaster]gi|21430308|gb|AAM50832.1| LD47792p [Drosophila melanogaster]gi|24644059|ref|NP_649489.1| CG9769-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(538965..539807); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101; MD5=1dafd31423420d2f9c [fly-100309-contam.fasta]
  • LD47792p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9769-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(538965..539807); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(538965..539807); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:complement(538965..539807); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101,FlyMine:FBpp0078532,modMine:FBpp0078532; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(4713243..4714085); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101,FlyMine:FBpp0078532,modMine:FBpp0078532; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(4713243..4714085); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101,FlyMine:FBpp0078532,modMine:FBpp0078532; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0078532 type=protein; loc=3R:complement(4713243..4714085); ID=FBpp0078532; name=CG9769-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101,FlyMine:FBpp0078532,modMine:FBpp0078532; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(4713243..4714085); ID=FBpp0078532; name=eIF3f1-PA; parent=FBgn0037270,FBtr0078892; dbxref=FlyBase:FBpp0078532,FlyBase_Annotation_IDs:CG9769-PA,GB_protein:AAF52101.1,REFSEQ:NP_649489,GB_protein:AAF52101,UniProt/Swiss-Prot:Q9VN50,FlyMine:FBpp0078532,modMine:FBpp0078532; MD5=1dafd31423420d2f9c90f0f37b8336a7; length=280; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: eukaryotic translation initiation factor 3 complex [ISS]
    Biological Process: autophagic cell death [IEP]
    salivary gland cell autophagic cell death [IEP]
    translational initiation [ISS]
    Molecular Function: translation initiation factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALNLTVRV HPVVLFQVVD AFERRNADSH RVIGTLLGSV DKGVVEVTNC FCVPHKEHDD  60
   61 QVEAELSYAL DMYDLNRKVN SNESVVGWWA TGNDVTNHSS VIHEYYAREC NNPVHLTVDT 120
  121 SLQGGRMGLR AYVCIQLGVP GGKSGCMFTP IPVELTSYEP ETFGLKLLQK TVGVSPAHRP 180
  181 KTVPPMLDLA QISEASTKLQ SLLDLILKYV DDVIAHKVTP DNAVGRQLLD LIHSVPHMTH 240
  241 EQFTQMFNAN VRNLLLVITL SQLIKTQLQL NEKLTFLPTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 43.30103 No description for 2o95A was found.
    2 View Details [216..280] MSA 2.095993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle