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Protein Overview: FBpp0297164, CG1...

General Information:
Name(s) found: FBpp0297164 [FlyBase]
CG12582-PA / FBpp0078603 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=3R:join(23137..23284,23459..23593,23981..24494,24552..24648,24727..25015,27565..28044,28098..28519,29504..29884,29935..30195); ID=FBpp0297164; name=CG12582-PD; parent=FBgn0037215,FBtr0306022; dbxref=REFSEQ:NP_001246899,GB_protein:AFH06218,FlyBase:FBpp0297164,FlyBase_Annotation_IDs:CG12582-PD; MD5=bbc1d25838059fa941bfc841ed7f3ef5; length=908; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12582 (CG12582, FBgn0037215). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23029..30295. It has the cytological map location 81F6. Based on sequence similarity, it is predicted to have molecular function</span>: beta-mannosidase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: carbohydrate metabolic process. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 908 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: beta-mannosidase activity [ISS]
    cation binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYGCGLLRN GTTGAVMVGL VCGLYVCSGQ CDKVEVIELS NWTITNQNGS LTIANQTLPL  60
   61 GIYSAFAPQV LDSYNDVGLR YLAYDNFTFS NFFQFDVHHF NRGHINLTFH GIDTVSEIRL 120
  121 NHQLLGRTDN MFVRYSYEVS SLLQAENFLE VEIQSPVVAA LARANALKEA KKSVPPECPN 180
  181 ERYHGECHMN MLRKMQASFS WDWGPAAPSA GIWKNVELEI YEVAVIREVD VDVSRVNGSY 240
  241 WNMHIRCFLD AGGWQNFNGR LVLYAVELLD RPVVVDRYAI KNISHLAPVI EFDQAVPNGK 300
  301 VVTWWPNGYG EQKLYPLHFT LKTWLGPDGP EVRSKTKSHK SLRVGFRTLD LVEDPAPDGV 360
  361 GNTFLFRVNG VEMFMKGSNY IPSHLLPEMQ TNEQISHLLR SAKEAHMNML RVWGGGVYES 420
  421 DYFYQLADSL GLLIWQDMMF ACAMYPVNDE FLSSVREEVR QNAMRLSHHP SVAIFVTNNE 480
  481 NEAALVQNWY GTLFERDRFE SEYRELYLAN VIHELKLVSH SSRPQPLVSS PSNGKASEPD 540
  541 NYISSNPQDN QNGDVHFYDY TKDGWDPGIF PRPRFVSEFG FQSFPGAYAW QRSKGEDDDL 600
  601 LGLITHRQHH PLGNVPVIAL VERHLPLPFP ENENYATALI YFSQIAQAMA TKVETELYRS 660
  661 LRDTPHRTMG ALYWQLNDVW VAPSWSSIDF YGNWKLLHYW ARDFLAPISI VALYEKSTDS 720
  721 LNISLICDQL EVDPRELNVV ANVHLWSQLL PRQSTSWDVT LRPNGVQYDK VIAISDLLQG 780
  781 EFTRTNAFLE LQLRRGQDVI SRTHFFPSSI AGAVGIEDPG LEFEIASRTC LNTTNVVRNS 840
  841 VSISIQVKRP AVFVYLELLK PYRYTLSENG FMQTEPMHVV YLTFDAPLCA RLLRKSDLRV 900
  901 LTVNDFMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..908] PSI-BLAST 159.0 No description for 2je8A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  5.00738488874746 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  4.76262930083697 bayes_pls_golite062009
  • hydrolase activity
    		•  3.98075336331567 bayes_pls_golite062009
  • mannosidase activity
    		•  2.76650385192253 bayes_pls_golite062009
  • beta-mannosidase activity
    		•  2.49892155617658 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  1.72953375487082 bayes_pls_golite062009
  • hexosaminidase activity
    		•  1.58801560896878 bayes_pls_golite062009
  • galactosidase activity
    		•  1.26155841119987 bayes_pls_golite062009
  • fucose binding
    		•  0.74796375141119 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.672371394066443 bayes_pls_golite062009
  • peptidase activity
    		•  0.618122797487524 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.340224150705178 bayes_pls_golite062009
  • binding
    		•  0.207604764313869 bayes_pls_golite062009
  • glucosidase activity
    		•  0.156515120651346 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.136349550054069 bayes_pls_golite062009
  • protein kinase activity
    		•  0.07005412193767 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0314396118267717 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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