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Protein Overview: GNBP2-PB

General Information:
Name(s) found: GNBP2-PB / FBpp0074861 [FlyBase]
Description(s) found:
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  • gi|6969635|gb|AAF33850.1|AF228473_1 Gram-negative bacteria binding protein 2 [Drosophila melanogaster] [NCBI NR]
  • gi|52782762|sp|Q9VVR4.3|BGBP2_DROME RecName: Full=Gram-negative bacteria-binding protein 2; Flags: Precursor [NCBI NR]
  • gi|23093163|gb|AAF49245.3| Gram-negative bacteria binding protein 2, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|17647477|ref|NP_524141.1| Gram-negative bacteria binding protein 2, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115924|emb|CAJ19047.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115919|emb|CAJ19043.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115914|emb|CAJ19039.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115909|emb|CAJ19035.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115904|emb|CAJ19031.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115889|emb|CAJ19019.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115884|emb|CAJ19015.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115879|emb|CAJ19011.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|119115874|emb|CAJ19007.1| Gram-negative bacteria binding protein 2 isoform B [Drosophila melanogaster] [NCBI NR]
  • Gram-negative bacteria-binding protein 2 OS=Drosophila melanogaster GN=GNBP2 PE=2 SV=3 [Swiss-Prot]
  • (Q9VVR4) Gram-negative bacteria binding protein 2 precursor [Swiss-Prot]
  • The gene Gram-negative bacteria binding protein 2 is referred to in FlyBase by the symbol Dmel\GNBP2 (CG4144, FBgn0040322). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:18666572..18668526. It has the cytological map location 75D6. Based on sequence similarity, it is predicted to have molecular function</span>: pattern recognition receptor activity. It is reported to be involved in the biological process</span>: defense response. 3 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • >CG4144-PB translation from_gene[CG4144 GNBP2 FBgn0040322] seq_release:3 mol_weight=52857 cds_boundaries:(3L:18,622,400..18,624,221[-]) aa_length:461 transcript_info:[CG4144-RB seq_release:3] gene_info:[gene symbol:GNBP2 FBgn0040322 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VVR4) CG4144 protein (Gram-negative bacteria binding protein 2) [DrosMelano7227.FASTAC.txt]
  • CG4144-PB, isoform B [Drosophila melanogaster]gi|17647477|ref|NP_524141.1| CG4144-PB [Drosophila melanogaster]gi|6969635|gb|AAF33850.1| Gram-negative bacteria binding protein 2 [Drosophila melanogaster]gi|52782762|sp|Q9VVR4|BGB2_DROME Gram-negative bac [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(18666618..18667075,18667148..18667204,18667269..18667582,18667645..18668077,18668319..18668442); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_ [fly-100309-contam.fasta]
  • Gram-negative bacteria-binding protein 2 precursor [nr-271106-contam.fasta]
  • CG4144-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Gram-negative bacteria binding protein 2 CG4144-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Gram-negative bacteria binding protein 2 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(18666618..18667075,18667148..18667204,18667269..18667582,18667645..18668077,18668319..18668442); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(18666618..18667075,18667148..18667204,18667269..18667582,18667645..18668077,18668319..18668442); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • RH04706p OS=Drosophila melanogaster GN=GNBP2-RB PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(18666618..18667075,18667148..18667204,18667269..18667582,18667645..18668077,18668319..18668442); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245,FlyMine:FBpp0074861,modMine:FBpp0074861; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(18675219..18675342,18674545..18674977,18674169..18674482,18674048..18674104,18673518..18673975)); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245,FlyMine:FBpp0074861,modMine:FBpp0074861; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(18675219..18675342,18674545..18674977,18674169..18674482,18674048..18674104,18673518..18673975)); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245,FlyMine:FBpp0074861,modMine:FBpp0074861; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0074861 type=protein; loc=3L:complement(join(18675219..18675342,18674545..18674977,18674169..18674482,18674048..18674104,18673518..18673975)); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245,FlyMine:FBpp0074861,modMine:FBpp0074861; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(18675219..18675342,18674545..18674977,18674169..18674482,18674048..18674104,18673518..18673975)); ID=FBpp0074861; name=GNBP2-PB; parent=FBgn0040322,FBtr0075094; dbxref=FlyBase:FBpp0074861,FlyBase_Annotation_IDs:CG4144-PB,GB_protein:AAF49245.3,REFSEQ:NP_524141,GB_protein:AAF49245,UniProt/Swiss-Prot:Q9VVR4,FlyMine:FBpp0074861,modMine:FBpp0074861; MD5=9231d0142a81b0f318e6160b75656af6; length=461; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 461 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEA]
    defense response [NAS]
    Molecular Function: pattern recognition receptor activity [ISS][NAS]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA]
    Gram-negative bacterial cell surface binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWEFLPCLL LLISNNKIFG FKVPSINFEM LKDEGFEVSI PDEPGIQRVF YMFQIDDTCP  60
   61 ALMDYITEAV NGSWVSKQKM SLQNNDKLQI SMLVQFNEEI FEKSETRVII NTRLLTTKDS 120
  121 SSRGITFLTG EGECQAYLAP AQQAKRCKAA QTIVSNGRHT CQGELIFEDN FSEAQLNKTT 180
  181 WKHDIRQRMY HVEEELVAFD DAARNCFVKE GELHIVPTIA TEVTDGSFKL GDRCTAVESP 240
  241 EQECNIAHGI FYSIKPPVFS AQIHTRNSFS FKFGKIVVRA KLPKGDWLFP YLMLQPVSTY 300
  301 AETHYAKQLR IAYARGNANL RTKQGDDISG NHLYGGGVVW HHGNAVQFLK DKISNSHYGD 360
  361 DFHNYTMIWQ RDKITLMVDD EVYGELYDGL PFFNEKCFII FGVTVGGFLN FDDSLLAKDV 420
  421 KPYKNREPRA ALSFWQHRDA WAPTWGRHSA MVIDYVRVYA E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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