Protein Overview: trn-PA

General Information:
Name(s) found:	trn-PA / FBpp0075624 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|7294497\|gb\|AAF49839.1\| tartan [Drosophila melanogaster] [NCBI NR] gi\|24663702\|ref\|NP_524055.2\| tartan [Drosophila melanogaster] [NCBI NR] gi\|15291189\|gb\|AAK92863.1\| GH10871p [Drosophila melanogaster] [NCBI NR] The gene tartan is referred to in FlyBase by the symbol Dmel\trn (CG11280, FBgn0010452). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:13107373..13111188. It has the cytological map location 70A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: open tracheal system development; branch fusion, open tracheal system. 11 alleles are reported. The phenotypes of these alleles are annotated with: embryonic dorsal trunk; dorsal mesothoracic disc; abdominal lateral transverse muscle 3; abdominal lateral transverse muscle 1; abdominal lateral transverse muscle 4; embryonic peripheral nervous system; abdominal dorsal transverse muscle 1; embryonic lateral trunk; embryonic/larval somatic muscle; abdominal lateral transverse muscle 2. It has one annotated transcript and one annotated polypeptide. [FlyBase] >CG11280-PA translation from_gene[CG11280 trn FBgn0010452] seq_release:3 mol_weight=81908 cds_boundaries:(3L:13,072,845..13,075,055[+]) aa_length:737 transcript_info:[CG11280-RA seq_release:3] gene_info:[gene symbol:trn FBgn0010452 gene_boundaries:(3L: [hmr_yeast5_DM3-1_pombe.fasta] (Q9VU51) TRN protein (GH10871P) [DrosMelano7227.FASTAC.txt] (AE003539) trn gene product [Drosophila melanogaster] [yeastflysequest.fasta] CG11280-PA [Drosophila melanogaster]gi\|15291189\|gb\|AAK92863.1\| GH10871p [Drosophila melanogaster]gi\|24663702\|ref\|NP_524055.2\| CG11280-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas] type=protein; loc=3L:13108398..13110611; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839; MD5=b2a900940d2c353c28b0beb3f1d3 [fly-100309-contam.fasta] tartan CG11280-PA [Drosophila melanogaster] [nr-271106-contam.fasta] GH10871p [Drosophila melanogaster] [nr-271106-contam.fasta] CG11280-PA [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=3L:13108398..13110611; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:13108398..13110611; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] GH10871p OS=Drosophila melanogaster GN=trn PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=3L:13108398..13110611; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839,FlyMine:FBpp0075624,modMine:FBpp0075624; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] GH10871p OS=Drosophila melanogaster GN=trn PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta] type=protein; loc=3L:13115298..13117511; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839,FlyMine:FBpp0075624,modMine:FBpp0075624; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:13115298..13117511; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839,FlyMine:FBpp0075624,modMine:FBpp0075624; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of M9PFH7, GH10871p OS=Drosophila melanogaster GN=trn PE=2 SV=1 [DROME.fasta.20160308] FBpp0075624 type=protein; loc=3L:13115298..13117511; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839,FlyMine:FBpp0075624,modMine:FBpp0075624; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=3L:13115298..13117511; ID=FBpp0075624; name=trn-PA; parent=FBgn0010452,FBtr0075890; dbxref=FlyBase:FBpp0075624,FlyBase_Annotation_IDs:CG11280-PA,GB_protein:AAF49839.1,REFSEQ:NP_524055,GB_protein:AAF49839,UniProt/TrEMBL:Q9VU51,FlyMine:FBpp0075624,modMine:FBpp0075624; MD5=b2a900940d2c353c28b0beb3f1d31363; length=737; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	737 amino acids
Gene Ontology:
Cellular Component:	plasma membrane [NAS]
Biological Process:	cell adhesion [NAS] branch fusion, open tracheal system [IMP] cell migration [TAS] open tracheal system development [IMP]
Molecular Function:	protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNMMIAFV GIWCILASIG VEPAAGLANC PPGCQCDDNT LVVQCGEGQL DVLPIALNPS  60
   61 IQRLVIKSNK IKTIDSSIQF YAELTFLDLS SNHLMTIPQR TFAYQKKLQE VHLNHNKIGQ 120
  121 ISNKTFIGLS AVTVLNLRGN QISELHQGTF TPLLKIEELN LGENRIGYLD PKAFDGLSQL 180
  181 RILYLDDNAL TTVPDPVIFQ AMPSLAELFL GMNTLQSIQA DAFQDLKGLT RLELKGASLR 240
  241 NISHDSFLGL QELRILDLSD NRLDRIPSVG LSKLVRLEQL SLGQNDFEVI SEGAFMGLKQ 300
  301 LKRLEVNGAL RLKRVMTGAF SDNGNLEYLN LSSNKMLLEV QEGALSGLSQ LKHVVLKANA 360
  361 LTSLAEGLFP WKDLQTLDLS ENPLSCDCRV MWLHNLLVAK NASQDDVSEL LCEFPERLRG 420
  421 ESLRHLNPAM MGCTHADPRK QALIGALLVG SAATITALAL VLYRCRHKIR ETIKGGLWGN 480
  481 SALGRKEREY QKTFCDEDYM SRHQHHPCSL GIHSTFPNTY TAPHHPGATH HYGMCPMPVN 540
  541 DLGAIDPQQK FQQLVVPTAT MISEKKLNNN KALVSQGAID DSASFVLHMK SATMGRDVHQ 600
  601 QNPQLNHYTK PQFLSATATV GDSCYSYADV PMVHGAPLGG PNQPQLRLTQ EHFKQRELYD 660
  661 QEMGSEILDH NYIYSNTHYS MPLEQLGRSK TPTPPPMPPA LPLRNGLCAT TGRRSFQQKS 720
  721 ASQKQQQNNN TLRQFTH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: trn-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: