YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: As-PA

General Information:
Name(s) found: As-PA / FBpp0075916 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7294742|gb|AAF50078.1| angelman syndrome [Drosophila melanogaster] [NCBI NR]
  • gi|21356487|ref|NP_648452.1| angelman syndrome [Drosophila melanogaster] [NCBI NR]
  • gi|17862314|gb|AAL39634.1| LD21888p [Drosophila melanogaster] [NCBI NR]
  • The gene Angelman syndrome is referred to in FlyBase by the symbol Dmel\As (CG6190, FBgn0061469). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:11199522..11203680. It has the cytological map location 68B1. Based on sequence similarity, it is predicted to have molecular function</span>: ubiquitin-protein ligase activity. There is experimental evidence that it is involved in the biological process</span>: locomotion; circadian rhythm; long-term memory. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6190-PA translation from_gene[CG6190 CG6190 FBgn0036148] seq_release:3 mol_weight=107591 cds_boundaries:(3L:11,164,332..11,167,738[-]) aa_length:973 transcript_info:[CG6190-RA seq_release:3] gene_info:[gene symbol:CG6190 FBgn0036148 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VTH1) CG6190 protein (LD21888p) [DrosMelano7227.FASTAC.txt]
  • (AE003545) CG6190 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6190-PA [Drosophila melanogaster]gi|17862314|gb|AAL39634.1| LD21888p [Drosophila melanogaster]gi|21356487|ref|NP_648452.1| CG6190-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(11199897..11200235,11200298..11200790,11200857..11201038,11201105..11201659,11201725..11201966,11202029..11202831,11202936..11203190,11203254..11203306); ID=FBpp0075916; name=As-PA; parent=FBgn0061469,FBtr0076186; dbxref=Fl [fly-100309-contam.fasta]
  • Angelman syndrome CG6190-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6190-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD21888p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(11199897..11200235,11200298..11200790,11200857..11201038,11201105..11201659,11201725..11201966,11202029..11202831,11202936..11203190,11203254..11203306); ID=FBpp0075916; name=As-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(11199897..11200235,11200298..11200790,11200857..11201038,11201105..11201659,11201725..11201966,11202029..11202831,11202936..11203190,11203254..11203306); ID=FBpp0075916; name=As-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Angelman syndrome OS=Drosophila melanogaster GN=Ube3a PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(11199897..11200235,11200298..11200790,11200857..11201038,11201105..11201659,11201725..11201966,11202029..11202831,11202936..11203190,11203254..11203306); ID=FBpp0075916; name=Ube3a-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078,FlyMine:FBpp0075916,modMine:FBpp0075916; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Angelman syndrome OS=Drosophila melanogaster GN=Ube3a PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(join(11210154..11210206,11209836..11210090,11208929..11209731,11208625..11208866,11208005..11208559,11207757..11207938,11207198..11207690,11206797..11207135)); ID=FBpp0075916; name=Ube3a-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078,FlyMine:FBpp0075916,modMine:FBpp0075916; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(11210154..11210206,11209836..11210090,11208929..11209731,11208625..11208866,11208005..11208559,11207757..11207938,11207198..11207690,11206797..11207135)); ID=FBpp0075916; name=Ube3a-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078,FlyMine:FBpp0075916,modMine:FBpp0075916; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • LD21888p OS=Drosophila melanogaster GN=Ube3a PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0075916 type=protein; loc=3L:complement(join(11210154..11210206,11209836..11210090,11208929..11209731,11208625..11208866,11208005..11208559,11207757..11207938,11207198..11207690,11206797..11207135)); ID=FBpp0075916; name=Ube3a-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078,FlyMine:FBpp0075916,modMine:FBpp0075916; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(11210154..11210206,11209836..11210090,11208929..11209731,11208625..11208866,11208005..11208559,11207757..11207938,11207198..11207690,11206797..11207135)); ID=FBpp0075916; name=Ube3a-PA; parent=FBgn0061469,FBtr0076186; dbxref=FlyBase:FBpp0075916,FlyBase_Annotation_IDs:CG6190-PA,GB_protein:AAF50078.1,REFSEQ:NP_648452,GB_protein:AAF50078,UniProt/TrEMBL:Q9VTH1,FlyMine:FBpp0075916,modMine:FBpp0075916; MD5=0f815e14d3e5b6ec1740870056122ef8; length=973; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 973 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: long-term memory [IMP]
    locomotion [IMP]
    protein modification process [IEA]
    circadian rhythm [IMP]
    dendrite morphogenesis [IMP]
    Molecular Function: ubiquitin-protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGGGGGEDD QHLPGVSSAS GSAAGAVGGR ATPEMKRSAV RSLIKRYFHQ LQSGCGNANC  60
   61 SNANCASSGK VAPMTPNEVA ARALQLFSQD AQLCEAFTSE ANSPQDVDML SPNDSSSSSS 120
  121 GSSTSTITSA STTTTTSRQS QSTPAAVVVP VSSPYLTQSV PQLDIAGAEH SSGDSEPCTP 180
  181 TLAPVHSLDA NSLIALYEQC RAADSYDRIC HAIGVVFSSV DRLGKSFIRS AEPAASSSLQ 240
  241 ELLANSPGAL NKEQLRTLEG EHDKDEDSTQ QVDEQSESAA NATATAESVE SEAEPEEEDD 300
  301 DVCSSQSSDT LVDLPGLRRV QRLLFGCQIR AITEKLTSSV IQLSDWVIYM RTDWERVIHC 360
  361 LVICFDLATN TNNSVVDMDY LDRVLPKLCQ AASAMPVPAQ ARLARIWAAH CSDQLHSLIA 420
  421 ACQQQITLQV LLDEESMREN ESIISVTKVL KIVFYANILA SELERPSCRV PLEDRTEAAT 480
  481 ASGSAAVEDD LFVYNSLLEP HMPKFAEDQF EKELQVSAID CRKPLIPLEE FYNEALSENI 540
  541 QMHHDYLSYK TLAMESEIGS GHANYFSFML YAFILTPSTK VDALYYDSRM RMYSERYSSL 600
  601 HSILNNIGQV GQEDNPRPDL KLTVRRDQLI NDALIGLEMV AMSNPKDLKK QLVVEFVGEQ 660
  661 GIDEGGVSKE FFQLIVEEIF NPAFGMFIQQ EETNNMWFNA TPFENGAQFT LIGIIIGLAI 720
  721 YNNVTLAVNF PMVVYRKLIG YCGTFADLSD WSPALYKSLK SMLDYQGQDM EEVFEQTFKI 780
  781 SYSDVFGDVV QHELVPNGQD VLVGQHNKEL FVNLYSDFLL NTNIEQQFNA FRKGFEMVTD 840
  841 ESPLKLLFRP EEIEMLVCGS REFDFVELEN STVYEGGYTE KSQYIQDFWS IVHAMPSEDK 900
  901 HKLLEFTTGS ARVPVGGLKC LRLLITRHGP DSDRLPTSHT CFNVLLLPEY SSREKLEERL 960
  961 MKAINYSKGF GML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle