Protein Overview: Patj-PB, Patj-PC...

General Information:
Name(s) found:	Patj-PA / FBpp0290839 [FlyBase] Patj-PB / FBpp0072664 [FlyBase] Patj-PC / FBpp0072662 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|7292161\|gb\|AAF47573.1\| patj, isoform C [Drosophila melanogaster] [NCBI NR] gi\|4972772\|gb\|AAD34781.1\| unknown [Drosophila melanogaster] [NCBI NR] gi\|42559535\|sp\|Q9NB04.2\|PATJ_DROME RecName: Full=Patj homolog [NCBI NR] gi\|24655632\|ref\|NP_728674.1\| patj, isoform B [Drosophila melanogaster] [NCBI NR] gi\|23092812\|gb\|AAN11498.1\| patj, isoform A [Drosophila melanogaster] [NCBI NR] gi\|19549925\|ref\|NP_599144.1\| patj, isoform A [Drosophila melanogaster] [NCBI NR] gi\|17137524\|ref\|NP_477342.1\| patj, isoform C [Drosophila melanogaster] [NCBI NR] gi\|10727230\|gb\|AAG22224.1\| patj, isoform B [Drosophila melanogaster] [NCBI NR] Patj homolog OS=Drosophila melanogaster GN=Patj PE=1 SV=2 [Swiss-Prot] The gene Patj is referred to in FlyBase by the symbol Dmel\Patj (CG12021, FBgn0067864). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:1798809..1802184. It has the cytological map location 62B4. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: morphogenesis of follicular epithelium; establishment or maintenance of polarity of follicular epithelium; establishment of planar polarity. 15 alleles are reported. The phenotype of these alleles is annotated with: ectoderm. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase] >CG12021-PB translation from_gene[CG12021 dlt FBgn0024246] seq_release:3 mol_weight=92853 cds_boundaries:(3L:1,779,778..1,782,450[+]) aa_length:871 transcript_info:[CG12021-RB seq_release:3] gene_info:[gene symbol:dlt FBgn0024246 gene_boundaries:(3L:1, [hmr_yeast5_DM3-1_pombe.fasta] >CG12021-PC translation from_gene[CG12021 dlt FBgn0024246] seq_release:3 mol_weight=92853 cds_boundaries:(3L:1,779,778..1,782,450[+]) aa_length:871 transcript_info:[CG12021-RC seq_release:3] gene_info:[gene symbol:dlt FBgn0024246 gene_boundaries:(3L:1, [hmr_yeast5_DM3-1_pombe.fasta] >CG12021-PA translation from_gene[CG12021 dlt FBgn0024246] seq_release:3 mol_weight=92853 cds_boundaries:(3L:1,779,778..1,782,450[+]) aa_length:871 transcript_info:[CG12021-RA seq_release:3] gene_info:[gene symbol:dlt FBgn0024246 gene_boundaries:(3L:1, [hmr_yeast5_DM3-1_pombe.fasta] (Q9NB04) Patj homolog [DrosMelano7227.FASTAC.txt] (AE003472) dlt gene product [alt 1] [Drosophila melanogaster] [yeastflysequest.fasta] (AE003472) dlt gene product [alt 2] [Drosophila melanogaster] [yeastflysequest.fasta] CG12021-PC, isoform C [Drosophila melanogaster]gi\|10727230\|gb\|AAG22224.1\| CG12021-PB, isoform B [Drosophila melanogaster]gi\|23092812\|gb\|AAN11498.1\| CG12021-PA, isoform A [Drosophila melanogaster]gi\|4972772\|gb\|AAD34781.1\| unknown [Drosophila melanogaste [nrdb_11152004_Chlamydomonas] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264 [fly-100309-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072663; name=Patj-PA; parent=FBgn0067864,FBtr0072780; dbxref=GB_protein:AAN11498.1,FlyBase:FBpp0072663,FlyBase_Annotation_IDs:CG12021-PA,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264 [fly-100309-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224; MD5=331264 [fly-100309-contam.fasta] Patj CG12021-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta] CG12021-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta] CG12021-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta] unknown [Drosophila melanogaster] [nr-271106-contam.fasta] Patj homolog [nr-271106-contam.fasta] Patj CG12021-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta] CG12021-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta] Patj CG12021-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072663; name=Patj-PA; parent=FBgn0067864,FBtr0072780; dbxref=GB_protein:AAN11498.1,FlyBase:FBpp0072663,FlyBase_Annotation_IDs:CG12021-PA,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] Patj, isoform B OS=Drosophila melanogaster GN=Patj PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224,FlyMine:FBpp0072664,modMine:FBpp0072664; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224,FlyMine:FBpp0072664,modMine:FBpp0072664; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224,FlyMine:FBpp0072664,modMine:FBpp0072664; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of Q9NB04, Patj, isoform B OS=Drosophila melanogaster GN=Patj PE=1 SV=1 [DROME.fasta.20160308] FBpp0072662 type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] FBpp0290839 type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] FBpp0072664 type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224,FlyMine:FBpp0072664,modMine:FBpp0072664; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072662; name=Patj-PC; parent=FBgn0067864,FBtr0072779; dbxref=GB_protein:AAF47573.1,FlyBase:FBpp0072662,FlyBase_Annotation_IDs:CG12021-PC,REFSEQ:NP_477342,GB_protein:AAF47573,UniProt/Swiss-Prot:Q9NB04; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0290839; name=Patj-PA; parent=FBgn0067864,FBtr0301625; dbxref=GB_protein:AAN11498.1,FlyBase_Annotation_IDs:CG12021-PA,FlyBase:FBpp0072663,FlyBase:FBpp0290839,REFSEQ:NP_599144,GB_protein:AAN11498,UniProt/Swiss-Prot:Q9NB04; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta] type=protein; loc=3L:join(1799149..1800699,1800760..1801824); ID=FBpp0072664; name=Patj-PB; parent=FBgn0067864,FBtr0072781; dbxref=GB_protein:AAG22224.1,FlyBase:FBpp0072664,FlyBase_Annotation_IDs:CG12021-PB,REFSEQ:NP_728674,GB_protein:AAG22224,UniProt/Swiss-Prot:Q9NB04,FlyMine:FBpp0072664,modMine:FBpp0072664; MD5=331264403f8f17aeed17c02be0c3247c; length=871; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	871 amino acids
Gene Ontology:
Cellular Component:	nuclear envelope [NAS] subapical complex [TAS] cytoplasm [NAS][TAS] septate junction [TAS] apical cortex [NAS] apical plasma membrane [IDA][NAS] plasma membrane [NAS]
Biological Process:	[NOT]establishment or maintenance of neuroblast polarity [IMP] cell-cell junction assembly [NAS] morphogenesis of an epithelium [TAS] zonula adherens assembly [NAS] establishment or maintenance of cell polarity [NAS] apical protein localization [TAS] establishment of planar polarity [IMP] establishment or maintenance of polarity of embryonic epithelium [TAS] morphogenesis of follicular epithelium [IMP] establishment or maintenance of polarity of follicular epithelium [IPI]
Molecular Function:	protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSADISSA LQQIEAVKKG IDESDDPKLQ MQTAESLSTI LGILQDPVFR TIVHVQDSLS  60
   61 ELNAQLAQHP SMLPNDFDID VAGNLVLSLN GGEVMYDFDE QRSSSHSHSA PGSPDKSGGV 120
  121 GEEPRPQSQN SKGAGVADLY ATDYAQIQAI ELVNDGTGLG FGIIGARNSG VIVKTILPGG 180
  181 VADKDGRLRS GDHILQIGDV NLHEMVSEQV AAVLRQSGTH VRLVVARPVE QSVPTPQYAL 240
  241 EPGTAVVPTR VLVDPAELER YLISTGYPEI FGESSTASTP QTTTEDDRFV YRGETSMLID 300
  301 PNIDLEELLA LPETEKLQVE LKKDANGLGI TIAGYVCEKE ELSGIFVKSV SPGSAADLSG 360
  361 RIRVNDRIIE VDGQSLQGYS NHQAVELLKK SGQVVNLRLE RYLRGPKFEQ LQQAIAANDK 420
  421 LPSSAPGTPS RAPMPTPVAT TSSATTTPSR SITRELEEEA LPAPEAFMTT PPSVTTMTTT 480
  481 TLSSFGAGKQ LVAVRDSLDG STKIIPTEVV PLADKTEAKN SGVITRHKYY TDPELSDDAE 540
  541 TEIIRKWQKI VGSDVEVIVA QIKKFAVGGL GISLEGTVDV EGGREVRPHH YIRSILPDGP 600
  601 VGVNGVLRSG DELLEVNGER LLGMNHLEVV AILKELPLDV RMVCGRNRNS SLLPFSDDTL 660
  661 KKLSNNFENL LPATDRLVKA KSDGSLATAG SVADGDSVAA AAASFSKLKS RSLEPLTGLA 720
  721 MWSSQPQIIE LVKGDRGLGF SILDYQDPLD PNDTLIVIRS LVPGGVAQLD GRLIPGDRLL 780
  781 FVNSINLENA SLDQAVQALK GASKGVVRIG VAKPLPMTDN SLKACSNAST TSEETLDAQP 840
  841 SPPALPTVAP PAMPPSASMG AEPDLIPDWR N

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: Patj-PB, Patj-PC...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: