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Protein Overview: CG3829-PA, FBpp0...

General Information:
Name(s) found: FBpp0310111 [FlyBase]
CG3829-PA / FBpp0072303 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=2R:join(20875738..20875993,20876054..20876145,20876203..20876430,20876485..20876757,20876815..20877406,20877466..20877818); ID=FBpp0310111; name=CG3829-PB; parent=FBgn0035091,FBtr0343506; dbxref=FlyBase:FBpp0310111,FlyBase_Annotation_IDs:CG3829-PB; MD5=54add89f0a5feaff1acf1d9c8b6a26b5; length=597; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3829 (CG3829, FBgn0035091). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20873478..20878012. It has the cytological map location 60E11. It is reported to have molecular function</span>: scavenger receptor activity. There is experimental evidence that it is involved in the biological process</span>: autophagic cell death; salivary gland cell autophagic cell death. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [NAS]
    membrane [IEA]
    Biological Process: autophagic cell death [IEP]
    salivary gland cell autophagic cell death [IEP]
    cell adhesion [IEA]
    defense response [NAS]
    Molecular Function: scavenger receptor activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHTKDAEMS MPARQESDRT SAPSVTKSLT LNSTRSGVGT GNFGGYGMTN GAEKPSVLHM  60
   61 IMEALGLRNQ AQNREPTSKD IGTLIMLGVM FLLFVISVTG FFVMWFTEYY NNTILENLIL 120
  121 AENSDTANSW LNPDPKYDTL LKAHIFHYPN IDDYLAGRAD KIKVVDVGPL TYQEHTVKDE 180
  181 VSFNKNFTVS FRDRKSYKFL PEKSSIGEHE VVRVPNVPLI SAAGPVKRMK AFERLAVSTW 240
  241 IKQFKEPLFK NLTVSEYLWG YEDSIIKLKS LGRGRRRFGL LMSRNGTSVD SVQLNTGEDD 300
  301 ITKFSIITQF NGMPQLDYWE GDECNRIDGS EPSMFSPHLL QDRSTVNVFL QVLCRKVPLH 360
  361 FEKEVTIYND IDVLRYRTPM DVFSHPSKNP ANQCYCQNTE LCLPSGVINA TKCYGDAPIF 420
  421 PSFPHFFTGD PVLYQDFEGI EPDAAVHQTY ADIHPRFGFP ISGASRVQIN IMLDKTPILR 480
  481 NQGDRLKNTT ILPLMWIEIT SGDFSEEVLH TLYLSTFGLN AIQQTLKYGT LLISVTSFSL 540
  541 IVAGVYYLNS RREQQLQESK TSAELEALNG GENVIVVHHI DMPVPLPVQD GGIHQGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..192] MSA 6.127992 View MSA. No confident structure predictions are available.
    3 View Details [193..330] MSA 4.140989 View MSA. No confident structure predictions are available.
    4 View Details [331..416] MSA 1.133989 View MSA. No confident structure predictions are available.
    5 View Details [417..597] MSA 6.128991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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