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Protein Overview: CG30427-PB, CG30...

General Information:
Name(s) found: CG30427-PF / FBpp0290179 [FlyBase]
CG30427-PE / FBpp0290178 [FlyBase]
CG30427-PB / FBpp0072320 [FlyBase]
Description(s) found:
Found 38 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG30427 (CG30427, FBgn0043792). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20816270..20824994. It has the cytological map location 60E5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding; catalytic activity. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 6 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30427 (CG30427, FBgn0043792). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20816270..20824994. It has the cytological map location 60E5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding; catalytic activity. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 6 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30427 (CG30427, FBgn0043792). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20816270..20824994. It has the cytological map location 60E5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: binding; catalytic activity. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 6 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 499 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phagocytosis, engulfment [IMP]
    metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVDLSPVQE YYKDKTIFIT GASGFMGKVL LEKLLYSCHS LKEVIIICRP KRGKAPETRL  60
   61 EEMFKLPIFQ RIKDERPEML KRVTIYQGDV TFDQLGLSGE SLKHVTENTN IVFHMAATLK 120
  121 LEGNLRDAID MNLLGTRRAL NVAKEMKQLE AFIHLSTAFC NCDQDVMYEK VYEFPHKPED 180
  181 LMRLAEWMDV KTLDAITPDL LKPHPNTYTY SKRLAELLVR DHYESMPVII ARPSIVSPAA 240
  241 YEPLPGWVDN LNGPTGLMIG CGKGVIRSVL VNQQNKAEVI PVDYAINGLI VIPYEFNKQA 300
  301 KRPTNVPVYN ITNADHRKMT MGTVVEMSKR INKQFPFNAG LWYPDPCVTT NQLYHNFNVA 360
  361 LFHWLPAYFL DFLMLILGQK RFMLRVQEKI STGLGVLQFF TLNAWCFRSD NYASLWNKLN 420
  421 EEDKAIFNMN MNTENTEEEY MIECAKGARK FILKEKEEDL PTARVHMKIQ RVVDVVCKTV 480
  481 IVGLFFYYLL KWTGVLAIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 64.522879 dTDP-glucose 4,6-dehydratase (RmlB)
    2 View Details [404..499] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  2.04225907952394 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.03461533859253 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.69771604880532 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • binding
    		•  0.405786564527334 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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