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View Structure Prediction Details

Protein: CG30427-PB, CG30...
Organism: Drosophila melanogaster
Length: 499 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30427-PB, CG30....

Description E-value Query
Range
Subject
Range
CG5065-PC, CG506... - This gene is referred to in FlyBase by the symbol Dmel\CG5065 (CG5065, FBgn0034145). It is a protein...
382.0 [0..2] [494..113]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVDLSPVQE YYKDKTIFIT GASGFMGKVL LEKLLYSCHS LKEVIIICRP KRGKAPETRL  60
   61 EEMFKLPIFQ RIKDERPEML KRVTIYQGDV TFDQLGLSGE SLKHVTENTN IVFHMAATLK 120
  121 LEGNLRDAID MNLLGTRRAL NVAKEMKQLE AFIHLSTAFC NCDQDVMYEK VYEFPHKPED 180
  181 LMRLAEWMDV KTLDAITPDL LKPHPNTYTY SKRLAELLVR DHYESMPVII ARPSIVSPAA 240
  241 YEPLPGWVDN LNGPTGLMIG CGKGVIRSVL VNQQNKAEVI PVDYAINGLI VIPYEFNKQA 300
  301 KRPTNVPVYN ITNADHRKMT MGTVVEMSKR INKQFPFNAG LWYPDPCVTT NQLYHNFNVA 360
  361 LFHWLPAYFL DFLMLILGQK RFMLRVQEKI STGLGVLQFF TLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 1g1aA
Description: dTDP-glucose 4,6-dehydratase (RmlB)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-hydroxyacyl-CoA dehydrogenase activity 2.04225907952394 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 2.03461533859253 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity 1.69771604880532 bayes_pls_golite062009
fatty acid synthase activity 1.23679054027553 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] reductase activity 0.604742541607263 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.418775403210681 bayes_pls_golite062009
binding 0.405786564527334 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.32207755075663 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [404-499]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AWCFRSDNYA SLWNKLNEED KAIFNMNMNT ENTEEEYMIE CAKGARKFIL KEKEEDLPTA  60
   61 RVHMKIQRVV DVVCKTVIVG LFFYYLLKWT GVLAIF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle