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Protein Overview: betaTub60D-PA

General Information:
Name(s) found: betaTub60D-PA / FBpp0072177 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Ã?&#142;Ã?²-Tubulin at 60D is referred to in FlyBase by the symbol Dmel\Ã?&#142;Ã?²Tub60D (CG3401, FBgn0003888). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20193405..20200626. It has the cytological map location 60C6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of cytoskeleton. There is experimental evidence that it is involved in the biological process</span>: response to light stimulus; larval behavior; axon guidance; axonogenesis. 23 alleles are reported. The phenotypes of these alleles are annotated with: rhabdomere; eye; optic lobe; axoneme; lamina. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: tubulin complex [NAS]
    microtubule [IDA][ISS][NAS]
    Biological Process: heart development [NAS]
    protein polymerization [IEA]
    larval behavior [IMP]
    axonogenesis [IMP]
    axon guidance [IMP]
    microtubule-based movement [IEA]
    response to light stimulus [IMP]
    microtubule-based process [ISS]
    Molecular Function: GTP binding [IEA][NAS]
    GTPase activity [IEA]
    structural molecule activity [IEA]
    structural constituent of cytoskeleton [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIVNLQAG QCGNQIGAKF WEIISEEHGI DSNGIYVGDS DLQLERVSVY YNEASAVTRS  60
   61 SGGKYVPRAI LLDLEPGTME SVRSGPYGQL FRPDNFVYGQ SGAGNNWAKG HYTEGAELVD 120
  121 NVLDVVRKEC ENCDCLQGFQ LTHSLGGGTG SGMGTLLISK IREEYPDRIM NTYSVVPSPK 180
  181 VSDTVVEPYN ATLSIHQLVE NTDETYCIDN EALYDICFRT LKVSNPSYGD LNHLVSLTMS 240
  241 GVTTCLRFPG QLNADLRKLA VNMVPFPRLH FFMPGFAPLT SRGSQQYRAL TVPELTQQMF 300
  301 DAKNMMAACD PRHGRYLTVA AVFRGRMSMK EVDEQMLAVQ NKNSSYFVEW IPNNVKTAVC 360
  361 DIPPKGLKMS STFIGNTTAI QELFKRISEQ FSAMFRRKAF LHWYTGEGMD EMEFTEAESN 420
  421 MNDLVSEYQQ YQEATADDEF DPEVNQEEVE GDCI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..454] PSI-BLAST 168.0 Tubulin:stathmin-like domain complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle